C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MAP6 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180834 MAP6D1 9606 - 3:183815876-183825594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318631 MAP6D1-001 183815876-183825578 protein_coding
  ENST00000431348 MAP6D1-002 183817062-183825594 protein_coding
  ENST00000445426 MAP6D1-003 183817377-183825521 nonsense_mediated_decay
  ENST00000463801 MAP6D1-004 183820163-183825225 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000318631ENST00000431348ENST00000463801
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000318631 0.398±0.00 1.343±0.00 17.260±13.01 0.479±0.00 0.574±0.00 0.032±0.00 0.081±0.02 1.695±0.00 0.975±0.37 0.480±0.08 1.349±0.00
ENST00000431348 N/A N/A N/A N/A N/A N/A 0.128±0.00 1.722±0.00 N/A N/A N/A
ENST00000463801 N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YG CIL_0003YG_0002 CGP 3:183697818-183825594
CIL_0005G0 CIL_0005G0_0001 CGP 3:183815876-183884933

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0005516 IEA calmodulin binding
GO:0005798 IEA Golgi-associated vesicle
GO:0005801 IEA cis-Golgi network
GO:0005874 IEA microtubule
GO:0007026 IEA negative regulation of microtubule depolymerization
GO:0008017 IEA microtubule binding
GO:0018009 IEA N-terminal peptidyl-L-cysteine N-palmitoylation
GO:0032418 IEA lysosome localization
GO:0048813 IEA dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079777 map6d1 MAP6 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000041205 Map6d1 MAP6 domain containing 1 protein_coding Mus_musculus

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