C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005G0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180834-ENSG00000175193 CGP 9606 3:183815876-183884933
GeneTranscriptPositionBiotype
ENSG00000175193 (PARL)
presenilin associated, rhomboid-like 		ENST00000311101 (PARL-002) 183829390-183884888 protein_coding
ENST00000317096 (PARL-001) 183829385-183884907 protein_coding
ENST00000417784 (PARL-009) 183829390-183844274 protein_coding
ENST00000418450 (PARL-010) 183829390-183842354 protein_coding
ENST00000421484 (PARL-004) 183829509-183884908 nonsense_mediated_decay
ENST00000435888 (PARL-007) 183829397-183884855 protein_coding
ENST00000449306 (PARL-005) 183833768-183884727 protein_coding
ENST00000450375 (PARL-008) 183829390-183842394 protein_coding
ENST00000469056 (PARL-003) 183862607-183884933 retained_intron
ENST00000488202 (PARL-006) 183840570-183844774 retained_intron
ENSG00000180834 (MAP6D1)
MAP6 domain containing 1 		ENST00000318631 (MAP6D1-001) 183815876-183825578 protein_coding
ENST00000431348 (MAP6D1-002) 183817062-183825594 protein_coding
ENST00000445426 (MAP6D1-003) 183817377-183825521 nonsense_mediated_decay
ENST00000463801 (MAP6D1-004) 183820163-183825225 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0005G0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041205-ENSMUSG00000033918 CGP 10090 16:20233310-20302387
GeneTranscriptPositionBiotype
ENSMUSG00000033918 (Parl)
presenilin associated, rhomboid-like 		ENSMUST00000048642 (Parl-001) 20279820-20302387 protein_coding
ENSMUST00000123070 (Parl-003) 20282744-20302340 retained_intron
ENSMUST00000126001 (Parl-008) 20285528-20288240 retained_intron
ENSMUST00000133153 (Parl-009) 20286956-20302354 nonsense_mediated_decay
ENSMUST00000136252 (Parl-002) 20279820-20302345 nonsense_mediated_decay
ENSMUST00000136700 (Parl-005) 20286930-20301329 processed_transcript
ENSMUST00000143648 (Parl-006) 20292920-20298165 retained_intron
ENSMUST00000152887 (Parl-004) 20297597-20301813 processed_transcript
ENSMUST00000153275 (Parl-010) 20298124-20302361 retained_intron
ENSMUST00000155832 (Parl-007) 20280003-20283244 retained_intron
ENSMUSG00000041205 (Map6d1)
MAP6 domain containing 1 		ENSMUST00000040880 (Map6d1-201) 20233310-20241358 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005G0_0001ENSG00000175193ENST00000311101ENST00000317096ENST00000417784ENST00000418450ENST00000421484ENST00000435888ENST00000449306ENST00000450375ENST00000469056ENST00000488202ENSG00000180834ENST00000318631ENST00000431348ENST00000445426ENST00000463801CIL_0005G0_0002ENSMUSG00000033918ENSMUST00000048642ENSMUST00000123070ENSMUST00000126001ENSMUST00000133153ENSMUST00000136252ENSMUST00000136700ENSMUST00000143648ENSMUST00000152887ENSMUST00000153275ENSMUST00000155832ENSMUSG00000041205ENSMUST00000040880
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005G0_0001ENSG00000175193ENST00000311101ENST00000317096ENST00000417784ENST00000418450ENST00000421484ENST00000435888ENST00000469056ENSG00000180834ENST00000318631ENST00000431348ENST00000463801CIL_0005G0_0002ENSMUSG00000033918ENSMUST00000048642ENSMUST00000123070ENSMUST00000136252ENSMUST00000136700ENSMUST00000153275ENSMUST00000155832ENSMUSG00000041205ENSMUST00000040880
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175193 ENST00000311101 9.576±0.00 7.839±0.00 2.990±0.00 7.945±0.00 13.805±0.00 12.006±0.00 3.314±2.77 3.003±2.26 4.304±1.48 5.940±0.57 4.459±1.06 6.251±3.44 4.791±0.90 8.418±1.82
ENST00000317096 15.492±0.00 14.896±0.00 N/A 8.240±3.94 16.495±0.00 4.886±0.55 6.212±4.80 6.816±0.00 3.809±1.12 6.084±0.00 8.382±0.00 16.028±3.47 15.070±5.91 8.095±0.48
ENST00000417784 N/A 12.565±0.00 2.594±0.00 N/A 4.693±0.00 N/A N/A 8.910±0.00 4.089±0.00 N/A 4.832±0.00 9.059±0.00 7.401±0.00 N/A
ENST00000418450 N/A 12.494±0.00 N/A N/A N/A 9.933±0.00 N/A 8.520±0.00 8.567±0.00 4.492±0.00 N/A 16.982±7.32 7.862±0.00 12.349±1.24
ENST00000421484 N/A N/A N/A 1.427±0.00 2.613±0.00 N/A N/A N/A N/A N/A N/A 1.081±0.00 N/A N/A
ENST00000435888 N/A N/A N/A N/A N/A N/A N/A 0.529±0.00 N/A N/A N/A N/A 3.896±0.00 N/A
ENST00000449306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469056 N/A N/A N/A N/A N/A N/A N/A 1.582±0.00 N/A N/A N/A N/A N/A N/A
ENST00000488202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180834 ENST00000318631 0.398±0.00 1.343±0.00 N/A 17.260±13.01 0.479±0.00 0.574±0.00 N/A 0.032±0.00 0.081±0.02 N/A 1.695±0.00 0.975±0.37 0.480±0.08 1.349±0.00
ENST00000431348 N/A N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A 1.722±0.00 N/A N/A N/A
ENST00000445426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033918 ENSMUST00000048642 15.016±2.16 9.237±3.68 28.777±2.56 15.126±4.65 10.299±3.09 11.564±2.34 20.322±1.38 25.724±3.15 15.800±3.02 11.083±1.14 15.664±0.88 11.561±2.49 13.799±4.84 11.982±5.96
ENSMUST00000123070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.646±0.00 N/A N/A
ENSMUST00000126001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.037±0.00 N/A N/A 5.758±0.23
ENSMUST00000136700 N/A 8.181±0.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153275 N/A 14.908±5.10 N/A N/A N/A 8.661±3.50 N/A N/A 11.145±2.85 8.138±0.10 N/A N/A 16.795±0.00 N/A
ENSMUST00000155832 N/A 4.844±0.00 N/A 17.006±0.00 N/A N/A N/A N/A N/A N/A N/A 39.449±0.00 25.093±14.88 18.134±0.00
ENSMUSG00000041205 ENSMUST00000040880 0.099±0.06 4.994±1.29 0.218±0.06 2.116±1.06 0.301±0.04 0.069±0.02 0.128±0.05 0.056±0.02 0.037±0.01 0.028±0.02 0.027±0.01 1.717±0.72 0.048±0.03 0.586±0.32

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