C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol transfer protein, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180957 PITPNB 9606 - 22:27851669-27920134 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320996 PITPNB-002 27851670-27919255 protein_coding
  ENST00000335272 PITPNB-001 27851669-27919268 protein_coding
  ENST00000415296 PITPNB-003 27860196-27920134 protein_coding
  ENST00000436663 PITPNB-006 27873775-27919214 protein_coding
  ENST00000455418 PITPNB-201 27854871-27919258 protein_coding
  ENST00000460566 PITPNB-005 27896900-27919256 retained_intron
  ENST00000465179 PITPNB-008 27894161-27896702 retained_intron
  ENST00000471825 PITPNB-004 27910448-27919244 retained_intron
  ENST00000477861 PITPNB-007 27854906-27898073 retained_intron
  ENST00000493007 PITPNB-009 27858431-27860615 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000335272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000335272 24.343±0.00 19.144±0.00 2.951±0.00 11.595±5.08 11.060±3.71 15.572±10.28 9.270±6.64 15.267±0.00 12.605±1.23 13.937±7.74 19.762±14.75 23.431±6.84 16.993±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WL CIL_0008WL_0001 VISTA 22:27276508-27877696
CIL_0008RE CIL_0008RE_0001 VISTA 22:27332266-27933748
CIL_0009D3 CIL_0009D3_0001 VISTA 22:27542325-28143730
CIL_0008Y6 CIL_0008Y6_0001 VISTA 22:27751293-28353466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001701 IEA in utero embryonic development
GO:0005622 IEA intracellular
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006629 NAS lipid metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006810 IEA transport
GO:0008289 IEA lipid binding
GO:0015914 TAS phospholipid transport
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036005 pitpnb phosphotidylinositol transfer protein, beta protein_coding Danio_rerio
ENSMUSG00000050017 Pitpnb phosphatidylinositol transfer protein, beta protein_coding Mus_musculus

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