C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335272 PITPNB-001 ENSG00000180957 9606 - 22:27851669-27919268 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000335272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000335272 24.343±0.00 19.144±0.00 2.951±0.00 11.595±5.08 11.060±3.71 15.572±10.28 9.270±6.64 15.267±0.00 12.605±1.23 13.937±7.74 19.762±14.75 23.431±6.84 16.993±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WL CIL_0008WL_0001 VISTA 22:27276508-27877696
CIL_0008RE CIL_0008RE_0001 VISTA 22:27332266-27933748
CIL_0009D3 CIL_0009D3_0001 VISTA 22:27542325-28143730
CIL_0008Y6 CIL_0008Y6_0001 VISTA 22:27751293-28353466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005622 IEA intracellular
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006629 NAS lipid metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006810 IEA transport
GO:0008289 IEA lipid binding
GO:0015914 TAS phospholipid transport
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086635 Pitpnb-201 protein_coding Mus_musculus 0 1267

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