C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Y6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm920 VISTA 9606 22:27751293-28353466
GeneTranscriptPositionBiotype
ENSG00000100154 (TTC28)
tetratricopeptide repeat domain 28 		ENST00000397906 (TTC28-001) 27978014-28679865 protein_coding
ENST00000431039 (TTC28-005) 27983599-27996239 protein_coding
ENST00000442232 (TTC28-003) 28028815-28094135 protein_coding
ENST00000468807 (TTC28-002) 28629428-28679812 retained_intron
ENST00000469670 (TTC28-004) 27992612-27996424 retained_intron
ENST00000480563 (TTC28-006) 27983752-27990076 retained_intron
ENST00000490475 (TTC28-007) 28296214-28443073 processed_transcript
ENST00000612946 (TTC28-201) 27978014-28306645 protein_coding
ENSG00000169184 (MN1)
meningioma (disrupted in balanced translocation) 1 		ENST00000302326 (MN1-001) 27748277-27801498 protein_coding
ENST00000424656 (MN1-003) 27750064-27796896 nonsense_mediated_decay
ENST00000497225 (MN1-002) 27750678-27791883 processed_transcript
ENSG00000239249 (RN7SL757P)
RNA, 7SL, cytoplasmic 757, pseudogene 		ENST00000466709 (RN7SL757P-201) 28056153-28056453 misc_RNA
ENSG00000279802 (CTA-544A11.1)
 ENST00000624411 (CTA-544A11.1-001) 28220486-28232600 antisense
CIL_0008Y6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm920 VISTA 10090 5:110955885-111557844
GeneTranscriptPositionBiotype
ENSMUSG00000050017 (Pitpnb)
phosphatidylinositol transfer protein, beta 		ENSMUST00000086635 (Pitpnb-201) 111330763-111388359 protein_coding
ENSMUSG00000070576 (Mn1)
meningioma 1 		ENSMUST00000094463 (Mn1-001) 111417442-111457033 protein_coding
ENSMUST00000138784 (Mn1-003) 111417362-111418073 processed_transcript
ENSMUSG00000083771 (Gm15988)
predicted gene 15988 		ENSMUST00000118677 (Gm15988-001) 111008480-111008846 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Y6_0001ENSG00000100154ENST00000397906ENST00000431039ENST00000442232ENST00000468807ENST00000469670ENST00000480563ENST00000490475ENST00000612946ENSG00000169184ENST00000302326ENST00000424656ENST00000497225ENSG00000239249ENST00000466709ENSG00000279802ENST00000624411CIL_0008Y6_0002ENSMUSG00000050017ENSMUST00000086635ENSMUSG00000070576ENSMUST00000094463ENSMUST00000138784ENSMUSG00000083771ENSMUST00000118677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Y6_0001ENSG00000100154ENST00000397906ENST00000612946ENSG00000169184ENST00000302326ENSG00000239249ENST00000466709ENSG00000279802ENST00000624411CIL_0008Y6_0002ENSMUSG00000050017ENSMUST00000086635ENSMUSG00000070576ENSMUST00000094463ENSMUSG00000083771ENSMUST00000118677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100154 ENST00000397906 N/A N/A N/A N/A N/A N/A 1.196±0.00 N/A N/A 2.144±0.00 1.053±0.00 N/A N/A 2.071±0.00
ENST00000431039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612946 4.515±0.00 2.833±0.00 N/A 3.093±0.00 2.244±0.92 2.715±0.00 2.707±0.00 1.546±0.04 2.388±0.00 1.776±0.00 N/A 4.779±2.26 3.909±0.00 4.142±0.29
ENSG00000169184 ENST00000302326 0.318±0.00 0.520±0.00 N/A 1.132±0.92 4.773±0.00 0.884±0.00 1.042±0.00 0.010±0.00 N/A 0.449±0.34 21.686±0.00 6.269±6.22 0.417±0.10 2.280±0.00
ENST00000424656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239249 ENST00000466709 N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00
ENSG00000279802 ENST00000624411 0.069±0.00 0.160±0.00 0.325±0.00 0.061±0.03 0.208±0.09 0.166±0.12 0.098±0.05 0.099±0.01 0.221±0.17 0.351±0.31 0.093±0.07 0.089±0.11 0.005±0.00 0.068±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000050017 ENSMUST00000086635 13.601±2.05 13.790±12.64 26.470±0.81 21.228±3.66 7.225±2.72 15.405±5.62 5.003±2.63 7.254±2.23 17.834±4.98 16.344±4.76 4.435±0.78 21.009±10.20 28.110±7.98 10.552±3.94
ENSMUSG00000070576 ENSMUST00000094463 2.481±1.40 0.659±0.14 3.031±0.80 12.652±6.53 1.248±0.54 1.106±0.16 1.132±0.37 0.266±0.13 0.997±0.71 1.274±0.19 5.097±1.24 2.141±0.73 1.103±0.32 0.074±0.06
ENSMUST00000138784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083771 ENSMUST00000118677 0.370±0.00 0.439±0.00 N/A N/A 1.850±1.65 0.557±0.19 0.310±0.15 0.204±0.10 0.086±0.04 0.412±0.14 N/A 0.642±0.46 N/A 0.175±0.00

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