C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25, member 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181035 SLC25A42 9606 + 19:19063999-19112888 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318596 SLC25A42-001 19063999-19112888 protein_coding
  ENST00000594070 SLC25A42-002 19095943-19106934 retained_intron
  ENST00000596819 SLC25A42-005 19105863-19110646 retained_intron
  ENST00000597661 SLC25A42-003 19064018-19106450 retained_intron
  ENST00000600251 SLC25A42-004 19101795-19105234 retained_intron
  ENST00000600275 SLC25A42-006 19101781-19107988 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318596ENST00000594070ENST00000600251ENST00000600275
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318596 3.363±0.00 3.656±0.00 1.370±0.00 2.382±0.37 2.553±2.25 2.944±0.00 2.724±1.95 13.488±0.00 9.010±8.31 1.738±0.98 16.879±0.00 3.686±3.44 1.640±0.51 2.138±0.05
ENST00000594070 N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A 0.903±0.00 0.453±0.00 0.904±0.00
ENST00000600251 N/A N/A N/A N/A N/A N/A N/A N/A 2.094±0.00 N/A N/A N/A N/A N/A
ENST00000600275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.761±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005347 IDA ATP transmembrane transporter activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0008152 IDA metabolic process
GO:0015217 IDA ADP transmembrane transporter activity
GO:0015228 IDA coenzyme A transmembrane transporter activity
GO:0015866 IDA ADP transport
GO:0015867 IDA ATP transport
GO:0016021 IEA integral component of membrane
GO:0035349 IDA coenzyme A transmembrane transport
GO:0043262 IDA adenosine-diphosphatase activity
GO:0080121 IDA AMP transport
GO:0080122 IDA AMP transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003470 slc25a42 solute carrier family 25, member 42 protein_coding Danio_rerio
ENSMUSG00000002346 Slc25a42 solute carrier family 25, member 42 protein_coding Mus_musculus

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