C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318596 SLC25A42-001 ENSG00000181035 9606 + 19:19063999-19112888 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318596
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318596 3.363±0.00 3.656±0.00 1.370±0.00 2.382±0.37 2.553±2.25 2.944±0.00 2.724±1.95 13.488±0.00 9.010±8.31 1.738±0.98 16.879±0.00 3.686±3.44 1.640±0.51 2.138±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005347 IDA ATP transmembrane transporter activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0008152 IDA metabolic process
GO:0015217 IDA ADP transmembrane transporter activity
GO:0015228 IDA coenzyme A transmembrane transporter activity
GO:0015866 IDA ADP transport
GO:0015867 IDA ATP transport
GO:0016021 IEA integral component of membrane
GO:0035349 IDA coenzyme A transmembrane transport
GO:0043262 IDA adenosine-diphosphatase activity
GO:0080121 IDA AMP transport
GO:0080122 IDA AMP transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063788 Slc25a42-201 protein_coding Mus_musculus 0 1037
ENSMUST00000110127 Slc25a42-001 protein_coding Mus_musculus 0 1037
ENSMUST00000139333 Slc25a42-002 retained_intron Mus_musculus 0 564
ENSMUST00000150706 Slc25a42-003 retained_intron Mus_musculus 0 473

Loading