C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25, member 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002346 Slc25a42 10090 - 8:70184340-70212305 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063788 Slc25a42-201 70184340-70212256 protein_coding
  ENSMUST00000110127 Slc25a42-001 70184340-70212305 protein_coding
  ENSMUST00000134596 Slc25a42-004 70192369-70212305 retained_intron
  ENSMUST00000139333 Slc25a42-002 70184340-70212305 retained_intron
  ENSMUST00000150706 Slc25a42-003 70187716-70212305 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063788ENSMUST00000110127ENSMUST00000134596ENSMUST00000139333ENSMUST00000150706
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063788 11.047±6.13 17.320±2.69 1.378±0.27 1.230±0.00 6.172±2.60 6.089±2.27 14.505±2.89 19.313±6.17 14.775±6.23 3.466±0.78 3.633±0.94 5.677±2.79 1.888±2.26 1.281±0.49
ENSMUST00000110127 4.816±0.64 5.042±0.00 2.743±1.17 2.256±0.00 6.171±2.30 2.603±1.03 14.368±3.78 18.198±6.57 11.594±4.78 4.721±0.42 9.525±2.24 11.668±3.60 0.915±0.51 1.531±0.74
ENSMUST00000134596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.439±0.00 0.106±0.00 N/A
ENSMUST00000139333 4.912±2.27 17.910±1.63 1.890±0.43 3.504±1.40 7.296±1.35 4.272±1.46 8.553±0.95 10.810±3.58 11.913±7.25 4.183±1.03 1.945±0.24 13.350±7.83 0.344±0.27 N/A
ENSMUST00000150706 2.820±0.00 N/A 2.110±0.00 1.278±0.00 N/A 2.386±0.00 N/A N/A N/A N/A N/A N/A 0.480±0.32 1.615±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005347 ISS ATP transmembrane transporter activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008152 IEA metabolic process
GO:0015217 ISS ADP transmembrane transporter activity
GO:0015228 ISS coenzyme A transmembrane transporter activity
GO:0015866 ISS ADP transport
GO:0015867 ISS ATP transport
GO:0016021 IEA integral component of membrane
GO:0035349 ISS coenzyme A transmembrane transport
GO:0043262 ISS adenosine-diphosphatase activity
GO:0080121 ISS AMP transport
GO:0080122 ISS AMP transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003470 slc25a42 solute carrier family 25, member 42 protein_coding Danio_rerio
ENSG00000181035 SLC25A42 solute carrier family 25, member 42 protein_coding Homo_sapiens

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