C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class I, V (pseudogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181126 HLA-V 9606 + 6:29790954-29797811 transcribed_unprocessed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000429037 HLA-V-001 29792234-29793136 transcribed_unprocessed_pseudogene
  ENST00000446817 HLA-V-005 29790954-29793101 processed_transcript
  ENST00000457107 HLA-V-003 29792223-29797811 processed_transcript
  ENST00000476601 HLA-V-002 29791906-29797811 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000429037ENST00000446817ENST00000457107
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000429037 0.817±0.00 N/A N/A 18.253±0.00 10.516±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000446817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.659±0.00 N/A
ENST00000457107 0.087±0.00 0.131±0.00 0.071±0.02 0.142±0.00 0.072±0.03 0.020±0.00 0.094±0.07 0.020±0.01 0.378±0.00 0.102±0.07 0.120±0.10 0.949±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0003 CGP 6:29722775-29831125

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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