C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182022 CHST15 9606 - 10:124007666-124093607 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346248 CHST15-001 124007668-124092454 protein_coding
  ENST00000435907 CHST15-201 124007666-124093607 protein_coding
  ENST00000462406 CHST15-002 124046013-124093582 processed_transcript
  ENST00000476765 CHST15-003 124021082-124038619 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346248ENST00000435907
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346248 2.987±0.00 9.275±0.00 2.199±0.00 2.684±0.37 3.272±1.42 N/A 1.712±0.00 1.277±0.00 2.506±0.13 1.464±0.00 6.901±0.00 1.413±0.64 1.274±0.82
ENST00000435907 3.604±0.00 8.076±0.00 3.200±1.38 0.380±0.00 5.280±0.00 0.618±0.44 1.750±0.74 1.340±0.73 3.322±0.00 2.758±0.00 8.172±2.88 2.139±0.27 2.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011W CIL_00011W_0001 CGP 10:123706207-124093607
CIL_00011M CIL_00011M_0001 CGP 10:124007666-124418976

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0008146 IEA sulfotransferase activity
GO:0016021 NAS integral component of membrane
GO:0019319 IDA hexose biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 TAS chondroitin sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0050656 IDA 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050659 IDA N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074527 CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein_coding Danio_rerio
ENSMUSG00000030930 Chst15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein_coding Mus_musculus

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