C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030930 Chst15 10090 - 7:132235780-132317228 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077472 Chst15-002 132235780-132316714 protein_coding
  ENSMUST00000080215 Chst15-001 132235780-132317228 protein_coding
  ENSMUST00000132508 Chst15-003 132270819-132278625 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077472ENSMUST00000080215
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077472 0.851±0.06 2.022±0.13 0.737±0.25 1.471±1.12 1.681±0.17 0.795±0.38 0.351±0.06 1.034±0.18 0.205±0.00 1.102±0.07 0.345±0.11 0.975±0.45 0.444±0.31 0.124±0.00
ENSMUST00000080215 4.466±1.72 6.123±1.17 4.262±0.65 3.339±1.44 4.116±1.72 3.572±1.18 2.152±0.71 6.382±0.94 2.041±0.42 6.209±0.09 0.791±0.26 2.942±1.08 2.277±1.56 0.417±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00011W CIL_00011W_0002 CGP 7:132042816-132317228
CIL_00011M CIL_00011M_0002 CGP 7:132235780-132576398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0016021 IEA integral component of membrane
GO:0019319 ISS hexose biosynthetic process
GO:0050656 ISS 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050659 ISS N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074527 CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein_coding Danio_rerio
ENSG00000182022 CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 protein_coding Homo_sapiens

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