C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346248 CHST15-001 ENSG00000182022 9606 - 10:124007668-124092454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346248
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346248 2.987±0.00 9.275±0.00 2.199±0.00 2.684±0.37 3.272±1.42 1.712±0.00 1.277±0.00 2.506±0.13 1.464±0.00 6.901±0.00 1.413±0.64 1.274±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011W CIL_00011W_0001 CGP 10:123706207-124093607
CIL_00011M CIL_00011M_0001 CGP 10:124007666-124418976

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0008146 IEA sulfotransferase activity
GO:0016021 NAS integral component of membrane
GO:0019319 IDA hexose biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 TAS chondroitin sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0050656 IDA 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050659 IDA N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080215 Chst15-001 protein_coding Mus_musculus 0 1877
ENSMUST00000077472 Chst15-002 protein_coding Mus_musculus 0 1877

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