C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tryptophan rich basic protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182093 WRB 9606 + 21:39380244-39428528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333781 WRB-001 39380244-39397889 protein_coding
  ENST00000380708 WRB-004 39387765-39397889 protein_coding
  ENST00000380713 WRB-009 39386093-39393280 protein_coding
  ENST00000398753 WRB-002 39380458-39397116 protein_coding
  ENST00000415847 WRB-013 39391778-39406446 protein_coding
  ENST00000442773 WRB-003 39380487-39390803 protein_coding
  ENST00000466787 WRB-006 39387791-39397254 nonsense_mediated_decay
  ENST00000471468 WRB-008 39380414-39391205 retained_intron
  ENST00000476914 WRB-017 39425871-39428528 processed_transcript
  ENST00000478273 WRB-018 39410869-39428528 protein_coding
  ENST00000480690 WRB-016 39425919-39428528 processed_transcript
  ENST00000487869 WRB-005 39380394-39392046 retained_intron
  ENST00000490860 WRB-007 39392896-39397104 retained_intron
  ENST00000623703 WRB-019 39380354-39414288 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333781ENST00000380708ENST00000380713ENST00000398753ENST00000466787ENST00000487869ENST00000490860ENST00000623703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333781 6.095±0.00 9.347±0.00 0.843±0.00 18.741±10.02 4.467±3.38 9.966±0.00 2.915±2.23 8.793±7.60 3.749±2.23 6.138±3.85 4.798±0.00 8.582±5.47 3.809±0.65 30.954±0.00
ENST00000380708 N/A N/A N/A 3.920±0.00 N/A 1.338±0.00 0.849±0.38 1.135±0.00 N/A N/A N/A 4.766±3.38 1.753±0.84 N/A
ENST00000380713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.820±0.00 N/A N/A
ENST00000398753 N/A N/A N/A 12.758±8.53 N/A 5.221±0.00 2.952±0.00 N/A N/A N/A 6.146±0.00 10.309±0.00 5.607±1.80 N/A
ENST00000466787 N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.672±0.00 12.226±0.00 N/A
ENST00000490860 N/A N/A N/A N/A N/A N/A N/A N/A 1.785±0.00 N/A N/A N/A N/A N/A
ENST00000623703 N/A N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GM CIL_0003GM_0001 CGP 21:39342315-39428528
CIL_0003GP CIL_0003GP_0001 CGP 21:39380244-39445805

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 TAS nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0071816 IEA tail-anchored membrane protein insertion into ER membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074271 wrb tryptophan rich basic protein protein_coding Danio_rerio
ENSMUSG00000023147 Wrb tryptophan rich basic protein protein_coding Mus_musculus

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