C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003GM_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000205581-ENSG00000182093 | CGP | 9606 | 21:39342315-39428528  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000157578  (LCA5L)Leber congenital amaurosis 5-like |
ENST00000288350 (LCA5L-001)
|
39405844-39445777 | protein_coding | |
|
ENST00000358268 (LCA5L-002)
|
39405860-39445733 | protein_coding | ||
|
ENST00000380671 (LCA5L-201)
|
39405844-39428522 | protein_coding | ||
|
ENST00000411566 (LCA5L-013)
|
39428215-39445733 | protein_coding | ||
|
ENST00000415863 (LCA5L-010)
|
39428285-39445769 | protein_coding | ||
|
ENST00000418018 (LCA5L-019)
|
39423245-39445760 | protein_coding | ||
|
ENST00000426783 (LCA5L-015)
|
39428305-39445769 | protein_coding | ||
|
ENST00000434281 (LCA5L-018)
|
39428208-39445803 | protein_coding | ||
|
ENST00000438404 (LCA5L-009)
|
39428210-39445719 | protein_coding | ||
|
ENST00000448288 (LCA5L-014)
|
39428172-39445778 | protein_coding | ||
|
ENST00000451131 (LCA5L-008)
|
39428462-39445752 | protein_coding | ||
|
ENST00000456017 (LCA5L-017)
|
39428402-39445780 | protein_coding | ||
|
ENST00000459939 (LCA5L-021)
|
39422988-39445761 | processed_transcript | ||
|
ENST00000466954 (LCA5L-012)
|
39423420-39445733 | processed_transcript | ||
|
ENST00000468009 (LCA5L-022)
|
39428222-39438936 | processed_transcript | ||
|
ENST00000480612 (LCA5L-011)
|
39443459-39445753 | retained_intron | ||
|
ENST00000484878 (LCA5L-016)
|
39411718-39445752 | processed_transcript | ||
|
ENST00000485895 (LCA5L-006)
|
39421560-39445777 | protein_coding | ||
|
ENST00000490184 (LCA5L-007)
|
39423240-39445775 | processed_transcript | ||
|
ENST00000491625 (LCA5L-003)
|
39422412-39445805 | retained_intron | ||
|
ENST00000495240 (LCA5L-020)
|
39405978-39411147 | processed_transcript | ||
|
ENSG00000182093 (WRB) tryptophan rich basic protein |
ENST00000333781 (WRB-001)
|
39380244-39397889 | protein_coding | |
|
ENST00000380708 (WRB-004)
|
39387765-39397889 | protein_coding | ||
|
ENST00000380713 (WRB-009)
|
39386093-39393280 | protein_coding | ||
|
ENST00000398753 (WRB-002)
|
39380458-39397116 | protein_coding | ||
|
ENST00000415847 (WRB-013)
|
39391778-39406446 | protein_coding | ||
|
ENST00000442773 (WRB-003)
|
39380487-39390803 | protein_coding | ||
|
ENST00000466787 (WRB-006)
|
39387791-39397254 | nonsense_mediated_decay | ||
|
ENST00000471468 (WRB-008)
|
39380414-39391205 | retained_intron | ||
|
ENST00000476914 (WRB-017)
|
39425871-39428528 | processed_transcript | ||
|
ENST00000478273 (WRB-018)
|
39410869-39428528 | protein_coding | ||
|
ENST00000480690 (WRB-016)
|
39425919-39428528 | processed_transcript | ||
|
ENST00000487869 (WRB-005)
|
39380394-39392046 | retained_intron | ||
|
ENST00000490860 (WRB-007)
|
39392896-39397104 | retained_intron | ||
|
ENST00000623703 (WRB-019)
|
39380354-39414288 | nonsense_mediated_decay | ||
|
ENSG00000205581 (HMGN1) high mobility group nucleosome binding domain 1 |
ENST00000288344 (HMGN1-004)
|
39342315-39348991 | nonsense_mediated_decay | |
|
ENST00000380747 (HMGN1-013)
|
39342879-39349647 | protein_coding | ||
|
ENST00000380748 (HMGN1-018)
|
39342692-39349053 | protein_coding | ||
|
ENST00000380749 (HMGN1-001)
|
39342315-39349200 | protein_coding | ||
|
ENST00000419378 (HMGN1-015)
|
39342788-39349040 | nonsense_mediated_decay | ||
|
ENST00000431390 (HMGN1-002)
|
39342315-39349140 | nonsense_mediated_decay | ||
|
ENST00000436324 (HMGN1-009)
|
39342646-39349088 | nonsense_mediated_decay | ||
|
ENST00000443046 (HMGN1-017)
|
39343009-39349054 | nonsense_mediated_decay | ||
|
ENST00000463631 (HMGN1-005)
|
39348065-39349054 | retained_intron | ||
|
ENST00000464078 (HMGN1-007)
|
39343137-39349054 | retained_intron | ||
|
ENST00000471260 (HMGN1-020)
|
39347492-39348620 | processed_transcript | ||
|
ENST00000479586 (HMGN1-019)
|
39347336-39349015 | processed_transcript | ||
|
ENST00000482192 (HMGN1-008)
|
39342804-39348623 | processed_transcript | ||
|
ENST00000482733 (HMGN1-014)
|
39347995-39349020 | retained_intron | ||
|
ENST00000485550 (HMGN1-021)
|
39342909-39348597 | processed_transcript | ||
|
ENST00000486741 (HMGN1-006)
|
39342315-39349099 | retained_intron | ||
|
ENST00000489072 (HMGN1-012)
|
39342800-39348862 | processed_transcript | ||
|
ENST00000490032 (HMGN1-010)
|
39342978-39348339 | processed_transcript | ||
|
ENST00000491183 (HMGN1-016)
|
39347147-39349067 | processed_transcript | ||
|
ENST00000492280 (HMGN1-003)
|
39342315-39349344 | retained_intron | ||
|
ENSG00000227406 (RNF6P1) ring finger protein (C3H2C3 type) 6 pseudogene 1 |
ENST00000444889 (RNF6P1-001)
|
39373763-39377066 | processed_pseudogene | |
| CIL_0003GM_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000040681-ENSMUSG00000023147 | CGP | 10090 | 16:96120618-96157852 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000023147 (Wrb) tryptophan rich basic protein |
ENSMUST00000023913 (Wrb-001)
|
96145407-96157852 | protein_coding | |
|
ENSMUST00000135448 (Wrb-004)
|
96145411-96151840 | protein_coding | ||
|
ENSMUST00000138198 (Wrb-003)
|
96145407-96146764 | processed_transcript | ||
|
ENSMUST00000140476 (Wrb-002)
|
96145407-96154775 | retained_intron | ||
|
ENSMUSG00000040681 (Hmgn1) high mobility group nucleosomal binding domain 1 |
ENSMUST00000050884 (Hmgn1-001)
|
96120618-96127729 | protein_coding | |
|
ENSMUST00000133885 (Hmgn1-004)
|
96122376-96127604 | protein_coding | ||
|
ENSMUST00000142179 (Hmgn1-002)
|
96126605-96127466 | retained_intron | ||
|
ENSMUST00000145713 (Hmgn1-003)
|
96122234-96125339 | retained_intron | ||
Expression Patterns
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