C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182774 RPS17 9606 - 15:82536753-82540564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330244 RPS17-001 82536753-82540564 protein_coding
  ENST00000558397 RPS17-009 82536756-82540437 non_stop_decay
  ENST00000559273 RPS17-006 82539584-82540456 retained_intron
  ENST00000559776 RPS17-008 82538665-82540419 retained_intron
  ENST00000560229 RPS17-002 82536755-82540457 retained_intron
  ENST00000560612 RPS17-003 82536763-82540142 retained_intron
  ENST00000560639 RPS17-007 82536809-82540452 retained_intron
  ENST00000561068 RPS17-010 82536759-82540131 nonsense_mediated_decay
  ENST00000561157 RPS17-005 82536755-82540459 protein_coding
  ENST00000561440 RPS17-004 82536788-82540133 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330244 538.441±0.00 767.596±0.00 41.683±0.00 197.696±44.21 324.648±155.39 487.237±335.18 167.042±106.79 320.138±149.69 332.355±166.13 672.760±556.48 344.435±220.38 1109.472±934.32 733.968±422.85 273.253±199.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000028 IBA ribosomal small subunit assembly
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005840 IEA:NAS ribosome
GO:0005925 IDA focal adhesion
GO:0006364 IMP rRNA processing
GO:0006412 IEA:IC translation
GO:0006413 NAS translational initiation
GO:0006414 IBA translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IBA cytosolic small ribosomal subunit
GO:0034101 IMP erythrocyte homeostasis
GO:0042274 IMP ribosomal small subunit biogenesis
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046157 RPS17 (2 of 2) ribosomal protein S17 protein_coding Danio_rerio
ENSMUSG00000061787 Rps17 ribosomal protein S17 protein_coding Mus_musculus

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