C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061787 Rps17 10090 - 7:81342732-81345254 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080813 Rps17-001 81342733-81345254 protein_coding
  ENSMUST00000130487 Rps17-005 81342732-81344531 processed_transcript
  ENSMUST00000134425 Rps17-002 81342740-81345234 retained_intron
  ENSMUST00000138936 Rps17-004 81344704-81345224 processed_transcript
  ENSMUST00000156346 Rps17-003 81343417-81345232 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080813ENSMUST00000134425ENSMUST00000138936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080813 603.301±167.81 313.453±14.87 961.667±88.96 363.922±244.33 548.176±77.82 771.957±64.48 411.999±80.54 711.337±16.04 750.637±403.60 458.383±68.85 446.313±32.49 1555.224±471.20 693.237±452.27 337.072±152.42
ENSMUST00000134425 N/A 26.861±2.88 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138936 N/A N/A N/A 26.178±0.00 N/A N/A N/A N/A N/A N/A N/A 178.736±0.00 134.190±5.85 28.335±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000028 IBA ribosomal small subunit assembly
GO:0003735 ISO structural constituent of ribosome
GO:0005925 IEA focal adhesion
GO:0006364 IEA rRNA processing
GO:0006412 ISO translation
GO:0006414 IBA translational elongation
GO:0016020 IEA membrane
GO:0022627 IBA cytosolic small ribosomal subunit
GO:0034101 IEA erythrocyte homeostasis
GO:0042274 IEA ribosomal small subunit biogenesis
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046157 RPS17 (2 of 2) ribosomal protein S17 protein_coding Danio_rerio
ENSG00000182774 RPS17 ribosomal protein S17 protein_coding Homo_sapiens

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