C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal recognition particle receptor (docking protein)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182934 SRPR 9606 - 11:126262919-126269144 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332118 SRPR-001 126262919-126268959 protein_coding
  ENST00000527817 SRPR-004 126265080-126266401 retained_intron
  ENST00000528744 SRPR-003 126267174-126268920 retained_intron
  ENST00000530680 SRPR-008 126267578-126269144 processed_transcript
  ENST00000531104 SRPR-005 126265021-126265657 retained_intron
  ENST00000532259 SRPR-002 126263474-126268982 protein_coding
  ENST00000532268 SRPR-006 126263841-126264755 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332118ENST00000527817ENST00000530680ENST00000532259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332118 38.699±0.00 62.895±0.00 8.696±0.00 15.102±6.76 18.521±8.11 19.594±9.24 17.037±12.58 44.459±16.85 30.824±27.07 39.226±28.59 28.353±20.18 44.672±15.60 40.622±7.23 48.343±16.19
ENST00000527817 N/A N/A N/A N/A 30.618±0.00 N/A N/A N/A N/A 31.026±0.00 N/A N/A N/A N/A
ENST00000530680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 169.765±0.00 138.405±0.00 N/A
ENST00000532259 22.804±0.00 N/A N/A N/A 12.672±0.00 10.742±0.00 N/A N/A N/A N/A N/A 29.985±0.00 17.734±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423
CIL_00050Z CIL_00050Z_0002 CGP 11:126211414-126269144
CIL_0002HQ CIL_0002HQ_0001 CGP 11:126262919-126278131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005047 IEA signal recognition particle binding
GO:0005525 IEA GTP binding
GO:0005783 TAS endoplasmic reticulum
GO:0005785 IEA signal recognition particle receptor complex
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006184 IEA GTP catabolic process
GO:0006412 TAS translation
GO:0006613 TAS cotranslational protein targeting to membrane
GO:0006614 TAS:IEA SRP-dependent cotranslational protein targeting to membrane
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016021 TAS integral component of membrane
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061124 srpr signal recognition particle receptor (docking protein) protein_coding Danio_rerio
ENSMUSG00000032042 Srpr signal recognition particle receptor ('docking protein') protein_coding Mus_musculus

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