C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP11-like, U3 small nucleolar ribonucleoprotein (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183520 UTP11L 9606 + 1:38009258-38024824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373014 UTP11L-001 38012742-38024824 protein_coding
  ENST00000483182 UTP11L-003 38009258-38019109 processed_transcript
  ENST00000486563 UTP11L-004 38012734-38016976 processed_transcript
  ENST00000488453 UTP11L-002 38016583-38023801 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373014ENST00000483182ENST00000486563ENST00000488453
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373014 7.354±0.00 10.954±0.00 1.159±0.00 6.373±0.61 6.271±2.60 4.902±1.13 5.608±3.25 5.956±2.90 6.794±0.87 3.309±0.87 21.856±12.13 10.705±2.85 10.056±4.32 13.922±4.85
ENST00000483182 5.737±0.00 12.786±0.00 0.829±0.00 5.028±2.64 6.217±0.00 4.865±0.00 6.748±2.20 5.616±0.00 7.425±0.00 4.469±1.25 15.666±8.32 N/A 5.756±1.97 N/A
ENST00000486563 N/A N/A 1.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488453 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.077±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095Y CIL_00095Y_0001 VISTA 1:37729017-38330016
CIL_0007UI CIL_0007UI_0001 VISTA 1:37794522-38395934
CIL_0008NZ CIL_0008NZ_0001 VISTA 1:37861857-38463593
CIL_0008EP CIL_0008EP_0001 VISTA 1:37891108-38491954
CIL_000892 CIL_000892_0001 VISTA 1:37897137-38498368
CIL_0007QI CIL_0007QI_0001 VISTA 1:37946403-38547845
CIL_0008ZP CIL_0008ZP_0001 VISTA 1:37962513-38566844
CIL_0007QK CIL_0007QK_0001 VISTA 1:37970270-38571704

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005730 IBA nucleolus
GO:0005737 IDA cytoplasm
GO:0006364 IBA:IEA rRNA processing
GO:0007399 IMP nervous system development
GO:0032040 IBA:IEA small-subunit processome
GO:0042274 IBA ribosomal small subunit biogenesis
GO:0043065 IMP positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039958 utp11l UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) protein_coding Danio_rerio
ENSMUSG00000028907 Utp11l UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) protein_coding Mus_musculus

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