C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028907 Utp11l 10090 - 4:124678160-124693600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030738 Utp11l-001 124678160-124693600 protein_coding
  ENSMUST00000153088 Utp11l-002 124678797-124693534 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030738ENSMUST00000153088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030738 2.829±0.64 2.251±0.83 7.433±1.37 4.870±2.65 1.776±0.43 3.506±0.87 1.647±0.24 4.152±0.71 5.538±1.91 3.617±0.59 6.041±1.67 5.324±4.24 12.869±4.08 3.218±0.30
ENSMUST00000153088 0.556±0.09 N/A 1.534±0.01 1.471±0.74 0.427±0.05 0.427±0.00 0.286±0.00 0.815±0.41 1.426±0.58 0.535±0.09 1.317±0.19 2.480±0.47 1.383±0.38 0.419±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SL CIL_0008SL_0002 VISTA 4:124095349-124696097
CIL_0008II CIL_0008II_0002 VISTA 4:124101702-124703017
CIL_0007QK CIL_0007QK_0002 VISTA 4:124155077-124756356
CIL_0008ZP CIL_0008ZP_0002 VISTA 4:124158302-124761497
CIL_0007QI CIL_0007QI_0002 VISTA 4:124177456-124779254
CIL_000892 CIL_000892_0002 VISTA 4:124220131-124821365
CIL_0008EP CIL_0008EP_0002 VISTA 4:124226300-124827138
CIL_0008NZ CIL_0008NZ_0002 VISTA 4:124251046-124852185
CIL_0007UI CIL_0007UI_0002 VISTA 4:124315408-124916812
CIL_00095Y CIL_00095Y_0002 VISTA 4:124371949-124972943
CIL_0003Q5 CIL_0003Q5_0002 CGP 4:124656807-124693600
CIL_0001ZV CIL_0001ZV_0002 CGP 4:124678160-124708611

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 ISS extracellular space
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006364 IBA rRNA processing
GO:0007399 ISS nervous system development
GO:0032040 IBA small-subunit processome
GO:0042274 IBA ribosomal small subunit biogenesis
GO:0043065 ISS positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039958 utp11l UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) protein_coding Danio_rerio
ENSG00000183520 UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) protein_coding Homo_sapiens

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