C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) assembly chaperone 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183527 PSMG1 9606 - 21:39174769-39183851 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331573 PSMG1-001 39174769-39183851 protein_coding
  ENST00000380900 PSMG1-002 39175590-39183488 protein_coding
  ENST00000411828 PSMG1-005 39175588-39183287 nonsense_mediated_decay
  ENST00000431628 PSMG1-006 39175590-39183385 nonsense_mediated_decay
  ENST00000481921 PSMG1-004 39175458-39178820 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331573ENST00000380900ENST00000411828ENST00000431628ENST00000481921
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331573 N/A N/A 0.233±0.00 1.333±0.57 0.784±0.00 0.914±0.00 0.383±0.00 N/A N/A N/A N/A 3.525±0.00 0.676±0.00 N/A
ENST00000380900 3.970±0.00 8.074±0.00 2.012±0.00 6.853±0.00 5.162±0.00 2.602±1.34 2.173±0.00 9.079±0.00 4.209±3.28 2.118±1.53 3.504±2.92 6.217±3.21 5.935±2.13 48.491±6.28
ENST00000411828 N/A N/A 0.784±0.00 2.464±0.00 0.871±0.00 3.364±0.00 1.178±0.68 N/A 2.253±0.00 N/A N/A 9.617±7.04 5.152±0.48 44.468±0.00
ENST00000431628 3.382±0.00 7.415±0.00 N/A 2.965±0.00 3.908±0.00 6.991±0.00 1.563±0.00 5.263±0.01 4.590±0.00 1.409±0.62 10.635±0.00 8.988±2.14 6.180±3.25 36.903±0.00
ENST00000481921 1.708±0.00 5.667±0.00 N/A 4.562±2.34 3.317±0.00 2.527±0.00 2.296±0.00 3.534±0.27 4.776±0.00 0.830±0.37 2.424±0.97 13.861±11.99 9.653±4.65 53.843±27.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UB CIL_0007UB_0001 VISTA 21:38689433-39291200
CIL_0000XL CIL_0000XL_0001 CGP 21:38805307-39183851
CIL_0003GK CIL_0003GK_0001 CGP 21:39174769-39321559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0021930 IEA cerebellar granule cell precursor proliferation
GO:0043248 IDA:IEA proteasome assembly
GO:0070628 IEA proteasome binding
GO:0080129 IEA proteasome core complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040620 psmg1 proteasome (prosome, macropain) assembly chaperone 1 protein_coding Danio_rerio
ENSMUSG00000022913 Psmg1 proteasome (prosome, macropain) assembly chaperone 1 protein_coding Mus_musculus

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