C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) assembly chaperone 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022913 Psmg1 10090 - 16:95979933-95990960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023630 Psmg1-001 95979933-95990960 protein_coding
  ENSMUST00000117044 Psmg1-003 95980037-95990890 protein_coding
  ENSMUST00000149066 Psmg1-004 95980037-95990890 nonsense_mediated_decay
  ENSMUST00000150692 Psmg1-002 95987986-95989898 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023630ENSMUST00000117044ENSMUST00000149066ENSMUST00000150692
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023630 9.144±1.26 4.889±2.40 12.323±3.95 6.602±1.75 5.025±0.59 9.994±1.03 12.571±1.76 20.204±8.66 4.408±0.50 5.842±0.58 7.949±3.79 16.726±8.46 12.102±2.80
ENSMUST00000117044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.754±0.00 N/A N/A
ENSMUST00000149066 5.348±1.91 3.230±1.05 N/A 7.291±5.87 1.715±0.00 N/A 4.340±1.11 N/A 1.617±0.27 2.233±0.50 5.548±2.49 3.018±0.00 N/A
ENSMUST00000150692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.089±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UB CIL_0007UB_0002 VISTA 16:95547910-96149564
CIL_0000XL CIL_0000XL_0002 CGP 16:95702075-95990960
CIL_0003GK CIL_0003GK_0002 CGP 16:95979933-96082526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0021930 IMP cerebellar granule cell precursor proliferation
GO:0043248 ISS proteasome assembly
GO:0070628 IDA proteasome binding
GO:0080129 IMP proteasome core complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040620 psmg1 proteasome (prosome, macropain) assembly chaperone 1 protein_coding Danio_rerio
ENSG00000183527 PSMG1 proteasome (prosome, macropain) assembly chaperone 1 protein_coding Homo_sapiens

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