C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183662 FAM19A1 9606 + 3:68004216-68545625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000478136 FAM19A1-001 68004216-68545625 protein_coding
  ENST00000491017 FAM19A1-003 68246811-68417421 processed_transcript
  ENST00000496687 FAM19A1-002 68006230-68545621 protein_coding
  ENST00000617084 FAM19A1-201 68417276-68417601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000478136ENST00000491017ENST00000496687ENST00000617084
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000478136 N/A 7.802±3.29 0.022±0.00 0.077±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A
ENST00000491017 N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.258±0.07
ENST00000496687 0.011±0.00 N/A 0.033±0.00 N/A 0.021±0.00 0.060±0.00 0.014±0.00 0.022±0.00 0.022±0.01 0.025±0.00 0.064±0.00
ENST00000617084 N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TH CIL_0001TH_0002 CGP 3:67360460-68545625
CIL_0001TG CIL_0001TG_0002 CGP 3:68004216-68932610

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062357 fam19a1 family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 protein_coding Danio_rerio
ENSDARG00000088837 CR631124.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000059187 Fam19a1 family with sequence similarity 19, member A1 protein_coding Mus_musculus

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