C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 19, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059187 Fam19a1 10090 + 6:96113154-96657198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075080 Fam19a1-002 96115311-96656467 protein_coding
  ENSMUST00000122120 Fam19a1-001 96113154-96657198 protein_coding
  ENSMUST00000125951 Fam19a1-004 96113242-96131950 processed_transcript
  ENSMUST00000129844 Fam19a1-003 96114649-96115917 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075080ENSMUST00000122120ENSMUST00000125951ENSMUST00000129844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075080 0.060±0.02 0.151±0.04 N/A 0.602±0.00 0.077±0.04 0.172±0.10 N/A 0.079±0.05 0.015±0.02 0.268±0.04 N/A 0.030±0.02 0.017±0.01 0.013±0.01
ENSMUST00000122120 N/A 0.472±0.00 0.018±0.00 2.022±0.97 0.066±0.00 0.215±0.17 N/A 0.094±0.02 0.031±0.02 0.596±0.22 0.026±0.00 0.049±0.06 0.008±0.00 0.030±0.00
ENSMUST00000125951 N/A 0.383±0.00 N/A N/A N/A N/A 0.060±0.00 0.140±0.00 0.018±0.00 N/A 0.082±0.00 N/A N/A 0.008±0.00
ENSMUST00000129844 N/A N/A N/A N/A N/A 0.569±0.00 N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TH CIL_0001TH_0003 CGP 6:95474134-96657198

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005576 IEA extracellular region
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062357 fam19a1 family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 protein_coding Danio_rerio
ENSDARG00000088837 CR631124.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000183662 FAM19A1 family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 protein_coding Homo_sapiens

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