C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 2C-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183977 PP2D1 9606 - 3:19979961-20012330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333083 PP2D1-002 19979961-20012267 nonsense_mediated_decay
  ENST00000389050 PP2D1-001 19985380-20012330 protein_coding
  ENST00000461033 PP2D1-003 20000975-20012257 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000333083ENST00000389050
Transcript ID Testis
ENST00000333083 5.822±0.00
ENST00000389050 7.200±3.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VJ CIL_0002VJ_0002 CGP 3:19879472-19985175
CIL_0004HT CIL_0004HT_0001 CGP 3:19947079-20012330
CIL_0004HU CIL_0004HU_0001 CGP 3:19979961-20154404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044957 Pp2d1 protein phosphatase 2C-like domain containing 1 protein_coding Mus_musculus

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