C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, Shal-related subfamily, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184408 KCND2 9606 + 7:120273668-120750331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331113 KCND2-001 120273668-120750331 protein_coding
  ENST00000425288 KCND2-002 120740844-120747738 protein_coding
  ENST00000473190 KCND2-003 120742321-120747722 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331113ENST00000425288ENST00000473190
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331113 0.498±0.00 5.237±1.48 1.522±0.00 0.270±0.23 0.032±0.00 0.017±0.00 0.262±0.25 N/A 0.090±0.02 0.721±0.47 0.169±0.12 0.817±0.25
ENST00000425288 N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 0.343±0.00 N/A 0.133±0.00 N/A
ENST00000473190 N/A N/A N/A N/A 0.131±0.00 N/A N/A 0.790±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QZ CIL_0003QZ_0001 CGP 7:118214673-120750331
CIL_0005U7 CIL_0005U7_0002 CGP 7:120273668-120858402

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001508 TAS action potential
GO:0005216 IEA ion channel activity
GO:0005249 NAS voltage-gated potassium channel activity
GO:0005250 IBA A-type (transient outward) potassium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043197 NAS dendritic spine
GO:0046872 IEA metal ion binding
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032799 kcnd2 potassium voltage-gated channel, Shal-related subfamily, member 2 protein_coding Danio_rerio
ENSMUSG00000060882 Kcnd2 potassium voltage-gated channel, Shal-related family, member 2 protein_coding Mus_musculus

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