C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shal-related subfamily, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331113 KCND2-001 ENSG00000184408 9606 + 7:120273668-120750331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000331113
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000331113 0.498±0.00 5.237±1.48 1.522±0.00 0.270±0.23 0.032±0.00 0.017±0.00 0.262±0.25 0.090±0.02 0.721±0.47 0.169±0.12 0.817±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QZ CIL_0003QZ_0001 CGP 7:118214673-120750331
CIL_0005U7 CIL_0005U7_0002 CGP 7:120273668-120858402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001508 TAS action potential
GO:0005216 IEA ion channel activity
GO:0005249 NAS voltage-gated potassium channel activity
GO:0005250 IBA A-type (transient outward) potassium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043197 NAS dendritic spine
GO:0046872 IEA metal ion binding
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081542 Kcnd2-001 protein_coding Mus_musculus 0 4198

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