C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005U7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032799-ENSDARG00000032389 CGP 7955 4:9430381-9663586
GeneTranscriptPositionBiotype
ENSDARG00000032389 (tspan12)
tetraspanin 12
ENSDART00000048003 (tspan12-001) 9639346-9663586 protein_coding
ENSDARG00000032799 (kcnd2)
potassium voltage-gated channel, Shal-related subfamily, member 2
ENSDART00000042673 (kcnd2-201) 9431133-9623008 protein_coding
ENSDART00000138890 (kcnd2-001) 9430381-9623992 protein_coding
CIL_0005U7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184408-ENSG00000106025 CGP 9606 7:120273668-120858402
GeneTranscriptPositionBiotype
ENSG00000106025 (TSPAN12)
tetraspanin 12
ENST00000222747 (TSPAN12-001) 120787320-120858357 protein_coding
ENST00000415871 (TSPAN12-002) 120788374-120858323 protein_coding
ENST00000424710 (TSPAN12-006) 120815751-120857199 protein_coding
ENST00000430985 (TSPAN12-004) 120838777-120858402 protein_coding
ENST00000433758 (TSPAN12-005) 120815729-120857353 protein_coding
ENST00000441017 (TSPAN12-007) 120810489-120857124 protein_coding
ENST00000450414 (TSPAN12-003) 120788322-120838797 nonsense_mediated_decay
ENSG00000184408 (KCND2)
potassium voltage-gated channel, Shal-related subfamily, member 2
ENST00000331113 (KCND2-001) 120273668-120750331 protein_coding
ENST00000425288 (KCND2-002) 120740844-120747738 protein_coding
ENST00000473190 (KCND2-003) 120742321-120747722 retained_intron
ENSG00000231295 (RP4-797C5.2)
ENST00000450480 (RP4-797C5.2-001) 120746738-120752514 antisense
CIL_0005U7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060882-ENSMUSG00000029669 CGP 10090 6:21215503-21852515
GeneTranscriptPositionBiotype
ENSMUSG00000029669 (Tspan12)
tetraspanin 12
ENSMUST00000031678 (Tspan12-001) 21771395-21852515 protein_coding
ENSMUST00000120965 (Tspan12-002) 21771395-21852088 protein_coding
ENSMUST00000123116 (Tspan12-004) 21795578-21851981 protein_coding
ENSMUST00000134635 (Tspan12-003) 21799950-21851914 protein_coding
ENSMUST00000143531 (Tspan12-005) 21835389-21852169 processed_transcript
ENSMUSG00000060882 (Kcnd2)
potassium voltage-gated channel, Shal-related family, member 2
ENSMUST00000081542 (Kcnd2-001) 21215503-21729805 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U7_0001ENSDARG00000032389ENSDART00000048003ENSDARG00000032799ENSDART00000042673ENSDART00000138890CIL_0005U7_0002ENSG00000106025ENST00000222747ENST00000415871ENST00000424710ENST00000430985ENST00000433758ENST00000441017ENST00000450414ENSG00000184408ENST00000331113ENST00000425288ENST00000473190ENSG00000231295ENST00000450480CIL_0005U7_0003ENSMUSG00000029669ENSMUST00000031678ENSMUST00000120965ENSMUST00000123116ENSMUST00000134635ENSMUST00000143531ENSMUSG00000060882ENSMUST00000081542
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U7_0001ENSDARG00000032389ENSDART00000048003ENSDARG00000032799ENSDART00000042673ENSDART00000138890CIL_0005U7_0002ENSG00000106025ENST00000222747ENST00000415871ENST00000430985ENST00000433758ENST00000441017ENST00000450414ENSG00000184408ENST00000331113ENST00000425288ENST00000473190ENSG00000231295ENST00000450480CIL_0005U7_0003ENSMUSG00000029669ENSMUST00000031678ENSMUST00000120965ENSMUST00000123116ENSMUST00000134635ENSMUSG00000060882ENSMUST00000081542
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032389 ENSDART00000048003 N/A N/A N/A 0.952±0.08 N/A N/A 13.635±1.39 0.720±0.42 N/A N/A 19.854±0.00 N/A N/A N/A
ENSDARG00000032799 ENSDART00000042673 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A
ENSDART00000138890 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.038±0.00 N/A N/A 0.715±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106025 ENST00000222747 1.440±0.00 N/A N/A 0.108±0.00 N/A N/A N/A N/A 0.970±0.00 N/A N/A 1.646±0.00 N/A 0.161±0.00
ENST00000415871 3.995±0.00 1.347±0.00 1.712±0.00 0.465±0.22 2.035±1.03 2.581±0.26 4.102±2.56 3.878±0.00 N/A N/A 0.234±0.00 2.346±1.59 2.415±0.00 0.641±0.00
ENST00000424710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430985 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.667±0.00 0.155±0.00 N/A N/A N/A
ENST00000433758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.430±0.00 N/A 1.050±0.00
ENST00000441017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A 6.569±0.00 0.951±0.00
ENST00000450414 N/A N/A N/A N/A N/A N/A 1.379±0.00 N/A N/A N/A 0.260±0.00 1.827±0.00 1.542±0.00 0.300±0.00
ENSG00000184408 ENST00000331113 0.498±0.00 N/A N/A 5.237±1.48 1.522±0.00 0.270±0.23 0.032±0.00 0.017±0.00 0.262±0.25 N/A 0.090±0.02 0.721±0.47 0.169±0.12 0.817±0.25
ENST00000425288 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 0.343±0.00 N/A 0.133±0.00 N/A
ENST00000473190 N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A 0.790±0.00 N/A N/A N/A N/A
ENSG00000231295 ENST00000450480 N/A N/A N/A 0.077±0.00 N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.163±0.06 N/A 0.047±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029669 ENSMUST00000031678 11.952±4.21 13.399±6.70 11.559±1.56 4.320±0.14 11.694±5.00 6.861±2.36 7.852±0.33 6.908±2.86 18.022±11.84 20.733±4.40 1.623±0.37 3.257±1.88 1.951±0.40 0.782±0.17
ENSMUST00000120965 N/A N/A N/A 1.059±0.00 N/A N/A N/A N/A N/A N/A N/A 0.494±0.00 0.381±0.25 N/A
ENSMUST00000123116 N/A N/A N/A 10.351±0.00 13.920±0.00 N/A 5.170±0.00 N/A N/A N/A N/A 12.280±0.00 2.061±0.00 1.053±0.43
ENSMUST00000134635 N/A N/A N/A N/A N/A N/A 8.429±0.00 N/A N/A N/A N/A N/A 1.021±0.00 0.570±0.00
ENSMUST00000143531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060882 ENSMUST00000081542 0.244±0.22 0.709±0.31 0.045±0.01 7.767±4.48 0.050±0.02 0.096±0.03 4.475±0.61 0.074±0.01 0.011±0.01 0.235±0.02 0.011±0.00 1.904±0.77 0.017±0.01 0.090±0.05

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