C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184465 WDR27 9606 - 6:169457212-169702048 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000423258 WDR27-014 169457355-169701586 protein_coding
  ENST00000441385 WDR27-002 169647648-169660692 protein_coding
  ENST00000448612 WDR27-010 169457212-169701653 protein_coding
  ENST00000464249 WDR27-007 169668607-169670700 processed_transcript
  ENST00000467418 WDR27-003 169657759-169663723 processed_transcript
  ENST00000474018 WDR27-009 169672322-169702048 protein_coding
  ENST00000476322 WDR27-004 169664177-169665092 retained_intron
  ENST00000479310 WDR27-001 169457212-169649233 processed_transcript
  ENST00000486490 WDR27-005 169662367-169666658 processed_transcript
  ENST00000496752 WDR27-006 169664286-169670693 retained_intron
  ENST00000546525 WDR27-013 169558321-169667275 processed_transcript
  ENST00000546953 WDR27-011 169669521-169701653 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000423258ENST00000441385ENST00000448612ENST00000467418ENST00000474018ENST00000476322ENST00000479310ENST00000496752ENST00000546525ENST00000546953
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000423258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.533±0.00
ENST00000441385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.802±0.00 N/A
ENST00000448612 N/A N/A 0.314±0.00 N/A 0.283±0.00 N/A N/A N/A 0.545±0.00 N/A 4.794±0.00 0.225±0.07 2.872±1.49
ENST00000467418 N/A N/A 1.080±0.00 N/A 3.010±1.60 N/A N/A 0.742±0.00 2.032±0.00 0.557±0.00 17.332±6.93 N/A N/A
ENST00000474018 0.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.759±0.00 N/A
ENST00000479310 N/A N/A N/A 0.581±0.00 N/A N/A N/A N/A N/A N/A 5.329±1.69 N/A N/A
ENST00000496752 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A
ENST00000546525 N/A N/A N/A 0.166±0.00 N/A 0.115±0.00 N/A N/A N/A N/A 2.772±0.00 0.123±0.00 0.694±0.00
ENST00000546953 N/A 0.427±0.00 0.724±0.00 N/A 0.361±0.00 0.241±0.00 0.406±0.00 0.764±0.00 N/A N/A 3.153±0.00 0.101±0.00 2.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W1 CIL_0004W1_0001 CGP 6:169215780-169702048
CIL_0004W2 CIL_0004W2_0001 CGP 6:169457212-169704856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053386 wdr27 WD repeat domain 27 protein_coding Danio_rerio
ENSDARG00000077977 wdr27 WD repeat domain 27 protein_coding Danio_rerio
ENSMUSG00000046991 Wdr27 WD repeat domain 27 protein_coding Mus_musculus

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