C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase type IVA, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184489 PTP4A3 9606 + 8:141391993-141432454 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329397 PTP4A3-201 141421388-141432454 protein_coding
  ENST00000349124 PTP4A3-202 141421388-141432454 protein_coding
  ENST00000520105 PTP4A3-002 141391995-141431520 protein_coding
  ENST00000521578 PTP4A3-001 141391993-141431294 protein_coding
  ENST00000523147 PTP4A3-004 141392021-141426951 protein_coding
  ENST00000524028 PTP4A3-003 141422018-141431520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329397ENST00000349124ENST00000520105ENST00000521578ENST00000523147ENST00000524028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329397 2.376±0.00 6.802±0.00 N/A 1.484±0.00 2.356±0.00 5.034±0.00 34.821±0.00 1.243±0.00 0.179±0.00 12.089±0.00 4.606±0.00 6.454±4.34 2.299±0.96 1.955±0.00
ENST00000349124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.416±0.00
ENST00000520105 N/A N/A N/A N/A 1.310±0.00 N/A 5.919±0.00 N/A N/A 5.953±0.00 N/A 14.684±0.00 3.805±2.16 4.538±0.00
ENST00000521578 13.870±0.00 24.920±0.00 0.801±0.00 2.770±1.38 5.556±3.05 6.185±5.96 60.772±52.46 3.519±0.00 0.819±0.65 8.540±6.84 47.366±0.00 7.880±3.85 5.771±3.36 4.553±0.97
ENST00000523147 14.629±0.00 37.254±0.00 N/A 10.760±0.00 20.527±0.00 24.185±0.00 N/A N/A 1.115±0.09 N/A N/A 13.346±11.00 6.854±0.00 11.914±0.78
ENST00000524028 10.439±0.00 34.306±0.00 N/A 7.495±0.00 7.110±5.17 6.678±6.13 108.309±0.00 3.781±0.00 0.782±0.00 12.793±0.00 33.820±23.86 12.399±3.40 3.721±0.00 12.139±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WG CIL_0007WG_0001 VISTA 8:141111247-141716252
CIL_0001XA CIL_0001XA_0001 CGP 8:141356500-141432454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0004727 TAS prenylated protein tyrosine phosphatase activity
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054814 PTP4A3 (2 of 2) protein tyrosine phosphatase type IVA, member 3 protein_coding Danio_rerio
ENSMUSG00000059895 Ptp4a3 protein tyrosine phosphatase 4a3 protein_coding Mus_musculus

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