C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001XA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204882-ENSG00000184489 CGP 9606 8:141356500-141432454
GeneTranscriptPositionBiotype
ENSG00000184489 (PTP4A3)
protein tyrosine phosphatase type IVA, member 3
ENST00000329397 (PTP4A3-201) 141421388-141432454 protein_coding
ENST00000349124 (PTP4A3-202) 141421388-141432454 protein_coding
ENST00000520105 (PTP4A3-002) 141391995-141431520 protein_coding
ENST00000521578 (PTP4A3-001) 141391993-141431294 protein_coding
ENST00000523147 (PTP4A3-004) 141392021-141426951 protein_coding
ENST00000524028 (PTP4A3-003) 141422018-141431520 protein_coding
ENSG00000204882 (GPR20)
G protein-coupled receptor 20
ENST00000377741 (GPR20-001) 141356500-141367267 protein_coding
ENSG00000244998 (CTD-3064M3.4)
ENST00000501440 (CTD-3064M3.4-001) 141389939-141392574 antisense
CIL_0001XA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045281-ENSMUSG00000059895 CGP 10090 15:73694604-73758766
GeneTranscriptPositionBiotype
ENSMUSG00000045281 (Gpr20)
G protein-coupled receptor 20
ENSMUST00000064166 (Gpr20-001) 73694604-73707505 protein_coding
ENSMUSG00000059895 (Ptp4a3)
protein tyrosine phosphatase 4a3
ENSMUST00000053232 (Ptp4a3-201) 73748026-73758766 protein_coding
ENSMUST00000163582 (Ptp4a3-202) 73724930-73758766 protein_coding
ENSMUST00000165541 (Ptp4a3-203) 73723145-73758766 protein_coding
ENSMUST00000167582 (Ptp4a3-204) 73723145-73758766 protein_coding
ENSMUSG00000084493 (Gm22106)
predicted gene, 22106
ENSMUST00000122544 (Gm22106-201) 73729164-73729290 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XA_0001ENSG00000184489ENST00000329397ENST00000349124ENST00000520105ENST00000521578ENST00000523147ENST00000524028ENSG00000204882ENST00000377741ENSG00000244998ENST00000501440CIL_0001XA_0002ENSMUSG00000045281ENSMUST00000064166ENSMUSG00000059895ENSMUST00000053232ENSMUST00000163582ENSMUST00000165541ENSMUST00000167582ENSMUSG00000084493ENSMUST00000122544
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XA_0001ENSG00000184489ENST00000329397ENST00000349124ENST00000520105ENST00000521578ENST00000523147ENST00000524028ENSG00000204882ENST00000377741ENSG00000244998ENST00000501440CIL_0001XA_0002ENSMUSG00000045281ENSMUST00000064166ENSMUSG00000059895ENSMUST00000053232ENSMUST00000163582ENSMUST00000165541ENSMUST00000167582ENSMUSG00000084493ENSMUST00000122544
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184489 ENST00000329397 2.376±0.00 6.802±0.00 N/A 1.484±0.00 2.356±0.00 5.034±0.00 34.821±0.00 1.243±0.00 0.179±0.00 12.089±0.00 4.606±0.00 6.454±4.34 2.299±0.96 1.955±0.00
ENST00000349124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.416±0.00
ENST00000520105 N/A N/A N/A N/A 1.310±0.00 N/A 5.919±0.00 N/A N/A 5.953±0.00 N/A 14.684±0.00 3.805±2.16 4.538±0.00
ENST00000521578 13.870±0.00 24.920±0.00 0.801±0.00 2.770±1.38 5.556±3.05 6.185±5.96 60.772±52.46 3.519±0.00 0.819±0.65 8.540±6.84 47.366±0.00 7.880±3.85 5.771±3.36 4.553±0.97
ENST00000523147 14.629±0.00 37.254±0.00 N/A 10.760±0.00 20.527±0.00 24.185±0.00 N/A N/A 1.115±0.09 N/A N/A 13.346±11.00 6.854±0.00 11.914±0.78
ENST00000524028 10.439±0.00 34.306±0.00 N/A 7.495±0.00 7.110±5.17 6.678±6.13 108.309±0.00 3.781±0.00 0.782±0.00 12.793±0.00 33.820±23.86 12.399±3.40 3.721±0.00 12.139±0.00
ENSG00000204882 ENST00000377741 0.175±0.00 0.282±0.00 0.307±0.00 0.280±0.13 0.769±0.52 N/A 0.227±0.00 0.237±0.00 0.110±0.07 0.937±0.00 N/A 0.661±0.05 0.483±0.16 0.420±0.24
ENSG00000244998 ENST00000501440 N/A 0.111±0.00 N/A 0.049±0.02 0.118±0.00 N/A 0.146±0.00 0.014±0.00 N/A 0.039±0.00 0.637±0.12 0.040±0.01 N/A 0.402±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045281 ENSMUST00000064166 0.671±0.06 0.210±0.09 1.566±0.08 0.105±0.05 0.490±0.18 22.537±8.81 0.482±0.15 0.254±0.08 0.030±0.02 0.170±0.01 0.129±0.06 1.357±0.63 0.849±0.67 0.328±0.15
ENSMUSG00000059895 ENSMUST00000053232 20.517±6.59 4.941±2.01 10.855±0.81 4.310±2.76 41.124±19.99 8.506±2.49 78.208±9.86 6.317±2.52 21.335±20.31 62.592±8.40 75.938±29.87 15.237±6.83 6.572±4.18 9.760±5.63
ENSMUST00000163582 N/A N/A N/A 0.976±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165541 N/A 10.811±2.49 N/A 1.733±0.00 13.474±4.19 3.074±0.00 N/A 1.251±0.14 1.815±0.26 N/A N/A 10.599±1.57 4.260±1.52 5.086±0.00
ENSMUST00000167582 N/A N/A N/A N/A 10.845±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084493 ENSMUST00000122544 N/A N/A 20.180±3.66 N/A 1259.010±0.00 N/A N/A N/A N/A N/A N/A 16.406±0.81 16.211±0.00 2008.450±0.00

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