C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase type IVA, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521578 PTP4A3-001 ENSG00000184489 9606 + 8:141391993-141431294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000521578
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000521578 13.870±0.00 24.920±0.00 0.801±0.00 2.770±1.38 5.556±3.05 6.185±5.96 60.772±52.46 3.519±0.00 0.819±0.65 8.540±6.84 47.366±0.00 7.880±3.85 5.771±3.36 4.553±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WG CIL_0007WG_0001 VISTA 8:141111247-141716252
CIL_0001XA CIL_0001XA_0001 CGP 8:141356500-141432454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0004727 TAS prenylated protein tyrosine phosphatase activity
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053232 Ptp4a3-201 protein_coding Mus_musculus 0 767
ENSMUST00000163582 Ptp4a3-202 protein_coding Mus_musculus 0 767
ENSMUST00000165541 Ptp4a3-203 protein_coding Mus_musculus 0 767
ENSMUST00000167582 Ptp4a3-204 protein_coding Mus_musculus 0 538

Loading