C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEL-like 2 (chicken)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184613 NELL2 9606 - 12:44508275-44921848 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333837 NELL2-006 44508603-44913928 protein_coding
  ENST00000395487 NELL2-201 44508275-44875654 protein_coding
  ENST00000429094 NELL2-002 44508278-44876374 protein_coding
  ENST00000437801 NELL2-001 44508628-44877097 protein_coding
  ENST00000452445 NELL2-010 44508282-44876355 protein_coding
  ENST00000546415 NELL2-020 44874999-44876286 retained_intron
  ENST00000547172 NELL2-018 44779688-44851847 processed_transcript
  ENST00000547636 NELL2-016 44521962-44523635 retained_intron
  ENST00000547751 NELL2-008 44665436-44876315 retained_intron
  ENST00000548531 NELL2-019 44815986-44875812 protein_coding
  ENST00000548826 NELL2-017 44815909-44876016 protein_coding
  ENST00000549027 NELL2-003 44508535-44876315 protein_coding
  ENST00000549668 NELL2-014 44532515-44703780 retained_intron
  ENST00000550139 NELL2-015 44522777-44532621 protein_coding
  ENST00000550313 NELL2-013 44610910-44777049 protein_coding
  ENST00000550462 NELL2-012 44774609-44777122 protein_coding
  ENST00000551601 NELL2-005 44508282-44876315 protein_coding
  ENST00000551949 NELL2-009 44875342-44914139 protein_coding
  ENST00000552993 NELL2-007 44774778-44921848 protein_coding
  ENST00000553120 NELL2-021 44779849-44875468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000333837ENST00000395487ENST00000429094ENST00000437801ENST00000452445ENST00000546415ENST00000547172ENST00000547636ENST00000547751ENST00000548826ENST00000549027ENST00000549668ENST00000550313ENST00000551601ENST00000552993ENST00000553120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000333837 N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A
ENST00000395487 N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000429094 N/A 1.016±0.00 N/A 24.489±5.63 0.082±0.00 0.354±0.00 N/A N/A N/A 2.550±0.00 1.271±1.09 N/A 0.327±0.00
ENST00000437801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.264±0.00
ENST00000452445 N/A 1.392±0.00 N/A 41.595±0.00 0.183±0.00 0.274±0.00 N/A 0.291±0.00 N/A 2.111±1.74 4.926±0.00 N/A 1.367±0.00
ENST00000546415 N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547172 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547636 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A 0.102±0.00 N/A
ENST00000547751 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.190±0.00 N/A N/A 0.096±0.00 N/A N/A
ENST00000548826 N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A N/A 0.837±0.00 N/A N/A
ENST00000549027 N/A N/A 0.118±0.00 N/A 0.116±0.00 N/A 0.045±0.00 0.286±0.00 0.034±0.00 N/A 0.454±0.00 0.141±0.00 0.389±0.00
ENST00000549668 N/A N/A N/A N/A 0.714±0.00 N/A 0.101±0.05 N/A N/A N/A 12.272±0.00 N/A N/A
ENST00000550313 0.128±0.00 N/A 0.232±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 0.105±0.00 N/A
ENST00000552993 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.359±0.00 N/A N/A 0.152±0.00 N/A N/A
ENST00000553120 N/A N/A N/A N/A 0.321±0.00 N/A N/A N/A 0.084±0.00 4.025±0.00 N/A 0.185±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R7 CIL_0006R7_0001 CGP 12:43835967-44921848
CIL_0006RA CIL_0006RA_0001 CGP 12:44508275-45051099

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062797 nell2b NEL-like 2b protein_coding Danio_rerio
ENSDARG00000087922 CABZ01083473.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090690 NELL2A Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000022454 Nell2 NEL-like 2 protein_coding Mus_musculus

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