C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 2, H2be
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184678 HIST2H2BE 9606 - 1:149842204-149886652 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369155 HIST2H2BE-001 149884459-149886652 protein_coding
  ENST00000369160 HIST2H2BE-201 149842204-149886641 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369155ENST00000369160
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369155 1.092±0.00 8.504±0.00 2.412±0.00 7.530±3.45 3.502±1.60 4.117±1.99 12.808±8.39 6.754±0.00 2.078±0.52 9.845±5.66 8.616±3.05 3.903±2.17 8.746±3.55 4.465±0.33
ENST00000369160 N/A N/A 17.060±0.00 8.214±0.00 36.639±0.00 53.350±0.00 19.616±0.00 10.038±0.00 29.920±0.00 26.555±0.00 16.962±0.00 49.292±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0004 CGP 1:149842188-149886652
CIL_0000UC CIL_0000UC_0005 CGP 1:149842204-149886652

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0002227 IDA innate immune response in mucosa
GO:0003677 NAS:IEA DNA binding
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0019731 IDA antibacterial humoral response
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034203 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051726 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051778 zgc:194989 zgc:194989 protein_coding Danio_rerio
ENSDARG00000068996 hist2h2l histone 2, H2, like protein_coding Danio_rerio
ENSDARG00000070289 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000076129 CABZ01086354.1 Histone H2B protein_coding Danio_rerio
ENSDARG00000078724 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000078941 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000086591 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000087854 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000088028 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000092743 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000093195 si:dkey-261m9.6 si:dkey-261m9.6 protein_coding Danio_rerio
ENSDARG00000093756 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094610 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094744 zgc:171759 zgc:171759 protein_coding Danio_rerio

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