C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zgc:171759
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000086591 zgc:171759 7955 + 25:37352915-37359410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000124306 zgc:171759-207 37359018-37359410 protein_coding
  ENSDART00000152735 zgc:171759-001 37352915-37359410 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000124306ENSDART00000152735
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000124306 0.939±0.00 0.237±0.00 0.857±0.00 N/A 0.380±0.00
ENSDART00000152735 0.263±0.12 0.077±0.03 N/A 0.047±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0004 UCNEbase 25:37216824-37485434

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124635 HIST1H2BJ histone cluster 1, H2bj protein_coding Homo_sapiens
ENSG00000158373 HIST1H2BD histone cluster 1, H2bd protein_coding Homo_sapiens
ENSG00000180596 HIST1H2BC histone cluster 1, H2bc protein_coding Homo_sapiens
ENSG00000184678 HIST2H2BE histone cluster 2, H2be protein_coding Homo_sapiens
ENSG00000185130 HIST1H2BL histone cluster 1, H2bl protein_coding Homo_sapiens
ENSG00000196890 HIST3H2BB histone cluster 3, H2bb protein_coding Homo_sapiens
ENSG00000197903 HIST1H2BK histone cluster 1, H2bk protein_coding Homo_sapiens
ENSG00000203814 HIST2H2BF histone cluster 2, H2bf protein_coding Homo_sapiens
ENSG00000233822 HIST1H2BN histone cluster 1, H2bn protein_coding Homo_sapiens
ENSG00000234289 H2BFS H2B histone family, member S (pseudogene) protein_coding Homo_sapiens
ENSG00000273703 HIST1H2BM histone cluster 1, H2bm protein_coding Homo_sapiens
ENSG00000273802 HIST1H2BG histone cluster 1, H2bg protein_coding Homo_sapiens
ENSG00000274290 HIST1H2BE histone cluster 1, H2be protein_coding Homo_sapiens
ENSG00000274641 HIST1H2BO histone cluster 1, H2bo protein_coding Homo_sapiens
ENSG00000275713 HIST1H2BH histone cluster 1, H2bh protein_coding Homo_sapiens
ENSG00000276410 HIST1H2BB histone cluster 1, H2bb protein_coding Homo_sapiens
ENSG00000277224 HIST1H2BF histone cluster 1, H2bf protein_coding Homo_sapiens
ENSG00000278588 HIST1H2BI histone cluster 1, H2bi protein_coding Homo_sapiens
ENSMUSG00000018102 Hist1h2bc histone cluster 1, H2bc protein_coding Mus_musculus
ENSMUSG00000047246 Hist1h2be histone cluster 1, H2be protein_coding Mus_musculus
ENSMUSG00000050936 Hist2h2bb histone cluster 2, H2bb protein_coding Mus_musculus
ENSMUSG00000056895 Hist3h2ba histone cluster 3, H2ba protein_coding Mus_musculus
ENSMUSG00000058385 Hist1h2bg histone cluster 1, H2bg protein_coding Mus_musculus
ENSMUSG00000062727 Hist1h2bk histone cluster 1, H2bk protein_coding Mus_musculus
ENSMUSG00000064168 Hist1h2bh histone cluster 1, H2bh protein_coding Mus_musculus
ENSMUSG00000068854 Hist2h2be histone cluster 2, H2be protein_coding Mus_musculus
ENSMUSG00000069268 Hist1h2bf histone cluster 1, H2bf protein_coding Mus_musculus
ENSMUSG00000069300 Hist1h2bj histone cluster 1, H2bj protein_coding Mus_musculus
ENSMUSG00000069303 Hist1h2br histone cluster 1 H2br protein_coding Mus_musculus
ENSMUSG00000069307 Hist1h2bq histone cluster 1, H2bq protein_coding Mus_musculus
ENSMUSG00000069308 Hist1h2bp histone cluster 1, H2bp protein_coding Mus_musculus
ENSMUSG00000075031 Hist1h2bb histone cluster 1, H2bb protein_coding Mus_musculus
ENSMUSG00000094338 Hist1h2bl histone cluster 1, H2bl protein_coding Mus_musculus
ENSMUSG00000095217 Hist1h2bn histone cluster 1, H2bn protein_coding Mus_musculus
ENSMUSG00000096807 Hist1h2bm histone cluster 1, H2bm protein_coding Mus_musculus

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