C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride channel, voltage-sensitive Kb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184908 CLCNKB 9606 + 1:16043736-16057308 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375667 CLCNKB-002 16048789-16057308 protein_coding
  ENST00000375679 CLCNKB-001 16043777-16057308 protein_coding
  ENST00000431772 CLCNKB-003 16052323-16057308 protein_coding
  ENST00000619181 CLCNKB-201 16043736-16057285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000375667ENST00000375679ENST00000431772ENST00000619181
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000375667 0.058±0.00 N/A 0.063±0.04 0.168±0.00 0.044±0.00 0.451±0.00 N/A 0.272±0.00 0.121±0.11 0.304±0.12 0.057±0.01 0.239±0.02
ENST00000375679 N/A 4.775±0.00 N/A N/A N/A 0.074±0.01 38.558±0.00 N/A N/A 0.270±0.00 0.145±0.00 N/A
ENST00000431772 N/A N/A 0.171±0.00 N/A 0.221±0.00 N/A 56.473±0.00 1.264±0.00 N/A N/A 0.216±0.17 N/A
ENST00000619181 N/A 7.844±0.00 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A 0.128±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0001 VISTA 1:15548708-16149793
CIL_0001WZ CIL_0001WZ_0001 CGP 1:16018875-16057308
CIL_00022V CIL_00022V_0002 CGP 1:16043736-16073632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006821 IEA chloride transport
GO:0007588 TAS excretion
GO:0016020 IEA membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS:IEA transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022560 clcnk chloride channel K protein_coding Danio_rerio
ENSMUSG00000006216 Clcnkb chloride channel Kb protein_coding Mus_musculus
ENSMUSG00000033770 Clcnka chloride channel Ka protein_coding Mus_musculus

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