C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride channel Kb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006216 Clcnkb 10090 - 4:141404353-141416014 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006378 Clcnkb-001 141404353-141416014 protein_coding
  ENSMUST00000105788 Clcnkb-002 141404353-141416014 protein_coding
  ENSMUST00000135486 Clcnkb-003 141404353-141405357 protein_coding
  ENSMUST00000145725 Clcnkb-004 141414296-141415961 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000006378ENSMUST00000105788ENSMUST00000135486ENSMUST00000145725
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000006378 0.018±0.01 0.017±0.00 0.034±0.01 0.144±0.11 N/A 88.277±14.94 0.026±0.01 0.035±0.01 0.041±0.00 N/A 0.067±0.00
ENSMUST00000105788 N/A N/A N/A 0.072±0.00 0.118±0.01 14.780±1.64 N/A N/A 0.070±0.00 0.271±0.00 N/A
ENSMUST00000135486 N/A N/A N/A N/A N/A N/A 0.179±0.00 0.178±0.00 N/A N/A 0.227±0.00
ENSMUST00000145725 N/A 0.316±0.00 N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0002 VISTA 4:141236761-141837859
CIL_0001WZ CIL_0001WZ_0002 CGP 4:141384610-141416014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0046872 IEA metal ion binding
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022560 clcnk chloride channel K protein_coding Danio_rerio
ENSG00000184908 CLCNKB chloride channel, voltage-sensitive Kb protein_coding Homo_sapiens
ENSG00000186510 CLCNKA chloride channel, voltage-sensitive Ka protein_coding Homo_sapiens

Loading