C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: U-box domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185019 UBOX5 9606 - 20:3107573-3160196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217173 UBOX5-001 3107573-3160196 protein_coding
  ENST00000348031 UBOX5-002 3107573-3160196 protein_coding
  ENST00000449731 UBOX5-003 3122374-3159876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217173ENST00000348031
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217173 1.661±0.00 2.287±0.00 0.581±0.00 2.615±0.00 1.603±0.00 0.912±0.00 1.196±0.00 2.054±0.00 1.007±0.05 2.375±0.00 1.626±0.00 2.467±0.45 1.155±0.23 2.294±0.00
ENST00000348031 0.762±0.00 N/A N/A 1.199±0.00 1.021±0.35 0.757±0.08 N/A 0.266±0.00 N/A 0.729±0.00 1.348±0.94 1.923±0.35 0.999±0.46 1.259±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000066 CIL_000066_0001 CGP 20:3082556-3160196
CIL_000067 CIL_000067_0001 CGP 20:3107573-3160196

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016604 IDA nuclear body
GO:0031625 IPI ubiquitin protein ligase binding
GO:0034450 ISS ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058563 ubox5 U-box domain containing 5 protein_coding Danio_rerio
ENSMUSG00000027300 Ubox5 U box domain containing 5 protein_coding Mus_musculus

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