C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U-box domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217173 UBOX5-001 ENSG00000185019 9606 - 20:3107573-3160196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217173 1.661±0.00 2.287±0.00 0.581±0.00 2.615±0.00 1.603±0.00 0.912±0.00 1.196±0.00 2.054±0.00 1.007±0.05 2.375±0.00 1.626±0.00 2.467±0.45 1.155±0.23 2.294±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000066 CIL_000066_0001 CGP 20:3082556-3160196
CIL_000067 CIL_000067_0001 CGP 20:3107573-3160196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016604 IDA nuclear body
GO:0031625 IPI ubiquitin protein ligase binding
GO:0034450 ISS ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028761 Ubox5-001 protein_coding Mus_musculus 0 1581
ENSMUST00000140581 Ubox5-002 nonsense_mediated_decay Mus_musculus 0 1081

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