C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U-box domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348031 UBOX5-002 ENSG00000185019 9606 - 20:3107573-3160196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000348031
Transcript ID Adipose Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000348031 0.762±0.00 1.199±0.00 1.021±0.35 0.757±0.08 0.266±0.00 0.729±0.00 1.348±0.94 1.923±0.35 0.999±0.46 1.259±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000066 CIL_000066_0001 CGP 20:3082556-3160196
CIL_000067 CIL_000067_0001 CGP 20:3107573-3160196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016604 IDA nuclear body
GO:0031625 IPI ubiquitin protein ligase binding
GO:0034450 ISS ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028761 Ubox5-001 protein_coding Mus_musculus 0 1242
ENSMUST00000140581 Ubox5-002 nonsense_mediated_decay Mus_musculus 0 1081

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