C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NODAL modulator 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185164 NOMO2 9606 - 16:18417325-18562211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330537 NOMO2-001 18417325-18562211 protein_coding
  ENST00000381474 NOMO2-002 18417330-18562106 protein_coding
  ENST00000543392 NOMO2-201 18499936-18562074 protein_coding
  ENST00000562312 NOMO2-004 18551473-18562176 nonsense_mediated_decay
  ENST00000564355 NOMO2-005 18538630-18542942 retained_intron
  ENST00000564991 NOMO2-003 18417337-18562074 nonsense_mediated_decay
  ENST00000567831 NOMO2-006 18520820-18529547 nonsense_mediated_decay
  ENST00000569051 NOMO2-007 18520899-18533102 nonsense_mediated_decay
  ENST00000569526 NOMO2-008 18418432-18424765 retained_intron
  ENST00000620440 NOMO2-202 18417326-18433412 protein_coding
  ENST00000621364 NOMO2-203 18499925-18562112 protein_coding
  ENST00000622306 NOMO2-204 18499925-18562112 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330537ENST00000381474ENST00000543392ENST00000562312ENST00000564991ENST00000569051ENST00000621364ENST00000622306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330537 N/A N/A N/A 0.392±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381474 N/A N/A N/A N/A N/A N/A 0.380±0.00 N/A N/A 0.871±0.00 N/A 0.468±0.00 N/A N/A
ENST00000543392 1.072±0.00 0.381±0.00 0.185±0.00 0.634±0.28 0.671±0.06 0.592±0.11 1.072±0.30 0.570±0.21 0.472±0.32 0.492±0.27 0.853±0.67 0.400±0.18 1.422±0.15 0.436±0.02
ENST00000562312 N/A N/A 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564991 1.072±0.00 0.381±0.00 0.185±0.00 0.634±0.28 0.671±0.06 0.592±0.11 0.894±0.48 0.570±0.21 0.472±0.32 0.492±0.27 0.853±0.67 0.400±0.18 1.422±0.15 0.436±0.02
ENST00000569051 N/A 0.698±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621364 N/A N/A N/A 0.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622306 N/A N/A N/A N/A N/A N/A N/A N/A 0.559±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RM CIL_0008RM_0001 VISTA 16:17846504-18447239

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078592 nomo nodal modulator protein_coding Danio_rerio
ENSMUSG00000030835 Nomo1 nodal modulator 1 protein_coding Mus_musculus

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