C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: l(3)mbt-like 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185513 L3MBTL1 9606 + 20:43507680-43550950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373133 L3MBTL1-010 43530969-43541189 retained_intron
  ENST00000373134 L3MBTL1-003 43514526-43541189 protein_coding
  ENST00000373135 L3MBTL1-005 43514413-43541895 protein_coding
  ENST00000418998 L3MBTL1-201 43507680-43541894 protein_coding
  ENST00000422861 L3MBTL1-011 43528707-43550950 protein_coding
  ENST00000427442 L3MBTL1-007 43507680-43541603 protein_coding
  ENST00000430781 L3MBTL1-019 43514469-43528891 retained_intron
  ENST00000434666 L3MBTL1-014 43507680-43515150 protein_coding
  ENST00000439769 L3MBTL1-015 43507710-43514754 protein_coding
  ENST00000445228 L3MBTL1-004 43530334-43536234 nonsense_mediated_decay
  ENST00000457824 L3MBTL1-009 43514549-43529231 processed_transcript
  ENST00000468336 L3MBTL1-008 43514451-43515565 retained_intron
  ENST00000471977 L3MBTL1-002 43540151-43548306 processed_transcript
  ENST00000473289 L3MBTL1-016 43514443-43515264 retained_intron
  ENST00000473981 L3MBTL1-006 43514708-43516140 processed_transcript
  ENST00000483547 L3MBTL1-013 43534636-43535937 retained_intron
  ENST00000485334 L3MBTL1-017 43528657-43534403 retained_intron
  ENST00000494117 L3MBTL1-018 43538975-43541894 retained_intron
  ENST00000497347 L3MBTL1-012 43530744-43535840 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000373133ENST00000373134ENST00000373135ENST00000418998ENST00000422861ENST00000430781ENST00000445228ENST00000457824ENST00000494117
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000373133 0.501±0.00 N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A 1.207±0.47 N/A N/A
ENST00000373134 N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A 0.153±0.00 N/A 0.307±0.00 N/A
ENST00000373135 N/A N/A 0.904±0.00 0.491±0.00 N/A N/A N/A N/A N/A 0.822±0.00 N/A N/A
ENST00000418998 N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A
ENST00000422861 0.386±0.00 1.023±0.00 2.147±0.00 N/A 0.265±0.00 N/A N/A 0.145±0.00 0.210±0.00 2.165±0.00 0.218±0.03 0.628±0.00
ENST00000430781 N/A N/A N/A N/A N/A N/A 1.054±0.00 N/A N/A N/A 1.191±0.00 5.947±0.00
ENST00000445228 N/A N/A N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A
ENST00000457824 N/A N/A N/A N/A N/A N/A N/A 1.007±0.00 N/A N/A N/A N/A
ENST00000494117 N/A N/A N/A N/A N/A 0.135±0.00 N/A 0.216±0.00 N/A 1.760±0.00 N/A 1.505±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044L CIL_00044L_0001 CGP 20:43457928-43550950

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0000793 IDA condensed chromosome
GO:0003682 IDA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 IDA nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007088 IMP regulation of mitosis
GO:0008270 IEA zinc ion binding
GO:0016568 IDA chromatin modification
GO:0030097 IEP hemopoiesis
GO:0031491 IDA nucleosome binding
GO:0031493 IDA nucleosomal histone binding
GO:0032093 IPI SAM domain binding
GO:0035064 IPI methylated histone binding
GO:0042393 IPI histone binding
GO:0042802 IPI identical protein binding
GO:0045652 IDA regulation of megakaryocyte differentiation
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0051726 NAS regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014828 l3mbtl1a l(3)mbt-like 1a (Drosophila) protein_coding Danio_rerio
ENSMUSG00000035576 L3mbtl1 l(3)mbt-like (Drosophila) protein_coding Mus_musculus

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