C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: l(3)mbt-like (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035576 L3mbtl1 10090 + 2:162943472-162974522 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035751 L3mbtl1-001 162943474-162974522 protein_coding
  ENSMUST00000124264 L3mbtl1-006 162948005-162949539 protein_coding
  ENSMUST00000125296 L3mbtl1-007 162948005-162949539 processed_transcript
  ENSMUST00000137108 L3mbtl1-005 162943475-162948887 processed_transcript
  ENSMUST00000149447 L3mbtl1-002 162943500-162947245 processed_transcript
  ENSMUST00000153416 L3mbtl1-003 162943472-162972021 retained_intron
  ENSMUST00000156954 L3mbtl1-004 162943475-162948887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035751ENSMUST00000124264ENSMUST00000125296ENSMUST00000137108ENSMUST00000149447ENSMUST00000153416ENSMUST00000156954
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035751 0.010±0.00 N/A N/A 0.019±0.01 0.058±0.04 0.032±0.02 0.036±0.01 0.016±0.00 0.019±0.00 0.075±0.00 0.062±0.02 0.061±0.00 0.599±0.00
ENSMUST00000124264 N/A N/A 4.533±0.00 N/A N/A N/A 0.111±0.03 0.075±0.02 N/A 0.121±0.00 N/A 0.300±0.05 0.434±0.00
ENSMUST00000125296 N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A N/A 0.216±0.00 N/A 1.659±0.00
ENSMUST00000137108 N/A 0.191±0.03 N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A
ENSMUST00000149447 N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A 0.197±0.00 N/A
ENSMUST00000153416 0.013±0.01 0.050±0.02 0.902±0.20 0.009±0.00 0.040±0.02 0.011±0.00 0.025±0.02 0.032±0.02 0.024±0.00 0.007±0.00 0.033±0.02 0.059±0.02 0.296±0.00
ENSMUST00000156954 N/A 0.096±0.06 N/A N/A N/A N/A N/A N/A 0.079±0.04 N/A 0.141±0.06 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044L CIL_00044L_0002 CGP 2:162931528-162974522
CIL_0003UN CIL_0003UN_0002 CGP 2:162943472-163014127

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0000793 ISS condensed chromosome
GO:0003682 ISS chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005654 ISS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007088 ISS regulation of mitosis
GO:0008270 IEA zinc ion binding
GO:0016568 ISS chromatin modification
GO:0030097 ISS hemopoiesis
GO:0031491 ISS nucleosome binding
GO:0031493 ISS nucleosomal histone binding
GO:0032093 IEA SAM domain binding
GO:0035064 ISS methylated histone binding
GO:0040029 NAS regulation of gene expression, epigenetic
GO:0042393 IEA histone binding
GO:0042802 IEA identical protein binding
GO:0045652 ISS regulation of megakaryocyte differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014828 l3mbtl1a l(3)mbt-like 1a (Drosophila) protein_coding Danio_rerio
ENSG00000185513 L3MBTL1 l(3)mbt-like 1 (Drosophila) protein_coding Homo_sapiens

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