C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lamin tail domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185522 LMNTD2 9606 - 11:554855-560779 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329451 LMNTD2-001 554864-560779 protein_coding
  ENST00000441853 LMNTD2-004 556926-560730 protein_coding
  ENST00000469990 LMNTD2-002 554855-556420 retained_intron
  ENST00000486629 LMNTD2-005 557399-559382 protein_coding
  ENST00000492515 LMNTD2-003 558476-560143 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000329451ENST00000441853ENST00000469990ENST00000486629
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000329451 N/A 1.881±0.00 N/A N/A N/A 1.222±0.94 2.132±0.00 N/A 2.556±0.95 0.396±0.22 8.569±4.56
ENST00000441853 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A
ENST00000469990 N/A N/A 0.225±0.00 0.652±0.00 N/A N/A N/A 0.354±0.00 N/A N/A N/A
ENST00000486629 N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040A CIL_00040A_0002 CGP 11:532242-554916
CIL_0003OU CIL_0003OU_0001 CGP 11:537527-560779
CIL_00073Z CIL_00073Z_0001 CGP 11:554855-564021

Gene Ontology
GO IDEvidence TypeGO Description
GO:0048026 IEA positive regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025500 1600016N20Rik lamin tail domain containing 2 protein_coding Mus_musculus

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