C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00040A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070524-ENSDARG00000070524 CGP 7955 25:26124403-26299507
GeneTranscriptPositionBiotype
ENSDARG00000070524 (hrasa)
v-Ha-ras Harvey rat sarcoma viral oncogene homolog a 		ENSDART00000064609 (hrasa-201) 26124408-26299507 protein_coding
ENSDART00000103608 (hrasa-202) 26136582-26145221 protein_coding
ENSDART00000150474 (hrasa-001) 26124403-26163292 protein_coding
ENSDARG00000070529 (TSG101 (3 of 5))
 ENSDART00000004002 (TSG101 (3 of 5)-201) 26240290-26242796 protein_coding
ENSDARG00000079917 (rassf7a)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a 		ENSDART00000112330 (rassf7a-201) 26193635-26368037 protein_coding
ENSDART00000150537 (rassf7a-002) 26193443-26216993 protein_coding
ENSDART00000150666 (rassf7a-001) 26182384-26217786 protein_coding
ENSDARG00000096081 (LRRC56 (2 of 2))
leucine rich repeat containing 56 		ENSDART00000150364 (LRRC56 (2 of 2)-001) 26167135-26175049 protein_coding
CIL_00040A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174775-ENSG00000161328 CGP 9606 11:532242-554916
GeneTranscriptPositionBiotype
ENSG00000161328 (LRRC56)
leucine rich repeat containing 56 		ENST00000270115 (LRRC56-001) 537527-554916 protein_coding
ENSG00000174775 (HRAS)
Harvey rat sarcoma viral oncogene homolog 		ENST00000311189 (HRAS-002) 532376-535534 protein_coding
ENST00000397594 (HRAS-004) 532242-534375 protein_coding
ENST00000397596 (HRAS-009) 532242-535339 protein_coding
ENST00000417302 (HRAS-201) 532243-535550 protein_coding
ENST00000451590 (HRAS-202) 532243-535550 protein_coding
ENST00000462734 (HRAS-005) 532246-533595 processed_transcript
ENST00000468682 (HRAS-003) 533795-537287 processed_transcript
ENST00000478324 (HRAS-007) 532242-533612 processed_transcript
ENST00000479482 (HRAS-008) 532642-533976 processed_transcript
ENST00000482021 (HRAS-010) 534279-534587 processed_transcript
ENST00000493230 (HRAS-001) 532242-535538 nonsense_mediated_decay
ENSG00000185522 (LMNTD2)
lamin tail domain containing 2 		ENST00000329451 (LMNTD2-001) 554864-560779 protein_coding
ENST00000441853 (LMNTD2-004) 556926-560730 protein_coding
ENST00000469990 (LMNTD2-002) 554855-556420 retained_intron
ENST00000486629 (LMNTD2-005) 557399-559382 protein_coding
ENST00000492515 (LMNTD2-003) 558476-560143 retained_intron
CIL_00040A_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025499-ENSMUSG00000038637 CGP 10090 7:141189105-141210055
GeneTranscriptPositionBiotype
ENSMUSG00000025499 (Hras)
Harvey rat sarcoma virus oncogene 		ENSMUST00000026572 (Hras-002) 141189105-141193960 protein_coding
ENSMUST00000097957 (Hras-001) 141190926-141194005 protein_coding
ENSMUST00000124314 (Hras-005) 141190927-141192504 processed_transcript
ENSMUST00000124971 (Hras-004) 141190930-141193882 nonsense_mediated_decay
ENSMUST00000128993 (Hras-003) 141190926-141193994 retained_intron
ENSMUST00000134008 (Hras-006) 141190930-141191977 processed_transcript
ENSMUST00000168550 (Hras-201) 141189934-141194004 protein_coding
ENSMUSG00000025500 (1600016N20Rik)
lamin tail domain containing 2 		ENSMUST00000026573 (1600016N20Rik-201) 141210043-141214080 protein_coding
ENSMUST00000170841 (1600016N20Rik-202) 141210043-141214082 protein_coding
ENSMUSG00000038637 (Lrrc56)
leucine rich repeat containing 56 		ENSMUST00000047093 (Lrrc56-001) 141195078-141210047 protein_coding
ENSMUST00000070458 (Lrrc56-003) 141194176-141210049 protein_coding
ENSMUST00000084446 (Lrrc56-002) 141194157-141210055 protein_coding
ENSMUST00000144008 (Lrrc56-005) 141196934-141199835 processed_transcript
ENSMUST00000144199 (Lrrc56-004) 141194179-141200938 retained_intron
ENSMUST00000150141 (Lrrc56-006) 141195143-141198283 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040A_0001ENSDARG00000070524ENSDART00000064609ENSDART00000103608ENSDART00000150474ENSDARG00000070529ENSDART00000004002ENSDARG00000079917ENSDART00000112330ENSDART00000150537ENSDART00000150666ENSDARG00000096081ENSDART00000150364CIL_00040A_0002ENSG00000161328ENST00000270115ENSG00000174775ENST00000311189ENST00000397594ENST00000397596ENST00000417302ENST00000451590ENST00000462734ENST00000468682ENST00000478324ENST00000479482ENST00000482021ENST00000493230ENSG00000185522ENST00000329451ENST00000441853ENST00000469990ENST00000486629ENST00000492515CIL_00040A_0003ENSMUSG00000025499ENSMUST00000026572ENSMUST00000097957ENSMUST00000124314ENSMUST00000124971ENSMUST00000128993ENSMUST00000134008ENSMUST00000168550ENSMUSG00000025500ENSMUST00000026573ENSMUST00000170841ENSMUSG00000038637ENSMUST00000047093ENSMUST00000070458ENSMUST00000084446ENSMUST00000144008ENSMUST00000144199ENSMUST00000150141
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040A_0001ENSDARG00000070524ENSDART00000064609ENSDART00000150474ENSDARG00000070529ENSDART00000004002ENSDARG00000079917ENSDART00000112330ENSDART00000150666ENSDARG00000096081ENSDART00000150364CIL_00040A_0002ENSG00000161328ENST00000270115ENSG00000174775ENST00000311189ENST00000397594ENST00000397596ENST00000417302ENST00000451590ENST00000462734ENST00000468682ENST00000478324ENST00000479482ENST00000493230ENSG00000185522ENST00000329451ENST00000441853ENST00000469990ENST00000486629CIL_00040A_0003ENSMUSG00000025499ENSMUST00000026572ENSMUST00000097957ENSMUST00000124971ENSMUST00000128993ENSMUST00000134008ENSMUST00000168550ENSMUSG00000025500ENSMUST00000026573ENSMUST00000170841ENSMUSG00000038637ENSMUST00000047093ENSMUST00000070458ENSMUST00000084446ENSMUST00000144199
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070524 ENSDART00000064609 N/A N/A N/A 3.669±0.94 N/A N/A 0.859±0.45 2.140±0.42 0.032±0.00 N/A 0.479±0.00 N/A N/A N/A
ENSDART00000103608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150474 N/A N/A N/A 0.464±0.00 N/A N/A 0.202±0.00 1.335±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000070529 ENSDART00000004002 N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.425±0.13 N/A N/A N/A N/A N/A N/A
ENSDARG00000079917 ENSDART00000112330 N/A N/A N/A 0.374±0.00 N/A N/A N/A 0.136±0.00 N/A N/A 0.065±0.00 N/A N/A N/A
ENSDART00000150537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150666 N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A 0.171±0.00 N/A N/A N/A
ENSDARG00000096081 ENSDART00000150364 N/A N/A N/A 0.086±0.03 N/A N/A 0.823±0.02 0.345±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161328 ENST00000270115 0.239±0.00 1.692±0.00 0.205±0.00 0.422±0.40 0.485±0.00 0.360±0.00 0.157±0.00 0.489±0.39 0.220±0.00 0.915±0.71 0.041±0.00 3.818±1.70 0.211±0.09 12.717±6.00
ENSG00000174775 ENST00000311189 7.209±0.00 6.080±0.00 N/A 8.117±4.45 16.743±0.00 5.269±4.25 8.565±0.00 8.459±6.81 1.746±0.85 15.313±0.00 7.649±6.80 1.969±1.89 18.016±11.59 6.612±0.66
ENST00000397594 2.533±0.00 N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A 3.734±0.00 N/A 3.672±3.13 N/A 5.544±3.15
ENST00000397596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.742±0.00 7.583±0.00 N/A
ENST00000417302 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.00 N/A N/A N/A N/A
ENST00000451590 N/A N/A N/A 2.514±0.00 0.146±0.00 6.590±0.00 2.771±0.00 N/A 1.028±0.00 2.931±0.00 N/A N/A 4.124±0.00 N/A
ENST00000462734 13.204±0.00 15.934±0.00 0.819±0.00 28.070±0.00 23.092±0.00 9.581±9.36 2.582±2.40 17.134±0.00 1.881±1.42 9.991±0.00 9.549±0.00 7.073±0.00 11.852±3.57 7.094±3.76
ENST00000468682 N/A N/A 0.380±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478324 N/A N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A N/A 0.617±0.00 6.136±0.00 N/A N/A
ENST00000479482 6.058±0.00 N/A N/A 15.057±0.00 10.550±9.19 12.653±0.00 N/A N/A N/A N/A 4.833±1.83 36.478±0.00 26.359±0.00 9.640±0.15
ENST00000482021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493230 N/A N/A N/A N/A N/A 4.311±0.00 N/A N/A N/A N/A N/A 8.111±4.33 N/A N/A
ENSG00000185522 ENST00000329451 N/A 1.881±0.00 N/A N/A N/A N/A N/A 1.222±0.94 N/A 2.132±0.00 N/A 2.556±0.95 0.396±0.22 8.569±4.56
ENST00000441853 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A
ENST00000469990 N/A N/A N/A 0.225±0.00 N/A 0.652±0.00 N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A
ENST00000486629 N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025499 ENSMUST00000026572 N/A N/A N/A 4.062±0.00 N/A 3.798±0.44 N/A 2.449±0.27 3.395±0.97 4.284±0.00 N/A 3.554±0.35 2.595±0.59 2.639±0.46
ENSMUST00000097957 22.324±12.77 16.825±5.19 40.773±5.29 50.914±8.86 23.718±6.50 23.935±11.88 17.072±8.15 17.583±7.88 23.527±10.78 11.118±0.00 36.583±5.72 32.548±6.26 27.247±10.75 17.945±1.02
ENSMUST00000124314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124971 N/A 6.223±0.14 N/A 14.867±0.00 7.779±0.00 N/A N/A N/A N/A 10.668±0.00 N/A 4.538±0.00 11.807±0.00 2.177±0.00
ENSMUST00000128993 N/A N/A 6.868±0.00 13.744±0.00 N/A N/A N/A N/A 6.153±0.63 N/A 5.391±0.00 4.823±0.53 5.126±1.30 6.368±0.00
ENSMUST00000134008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.036±0.00 N/A 19.409±0.00
ENSMUST00000168550 N/A 2.829±0.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025500 ENSMUST00000026573 1.617±0.00 1.147±0.00 4.630±1.09 1.650±0.57 1.231±0.16 3.412±1.25 N/A 1.824±0.33 1.547±1.03 2.083±0.57 0.132±0.00 2.459±0.81 1.897±1.09 63.552±40.31
ENSMUST00000170841 1.482±0.00 N/A N/A N/A N/A N/A N/A 1.158±0.00 N/A N/A N/A N/A 0.517±0.27 N/A
ENSMUSG00000038637 ENSMUST00000047093 0.913±0.31 1.620±0.55 0.987±0.21 5.236±3.36 1.686±0.38 2.242±0.34 0.477±0.14 2.006±0.82 4.678±3.42 4.725±0.67 0.297±0.20 4.057±1.40 0.264±0.00 31.775±3.58
ENSMUST00000070458 1.035±0.33 1.137±0.25 1.219±0.04 N/A 1.856±0.45 2.899±1.00 0.590±0.16 1.461±0.33 1.296±0.51 1.111±0.00 0.362±0.15 1.457±0.51 1.472±0.54 21.528±5.32
ENSMUST00000084446 N/A N/A N/A 0.557±0.00 N/A N/A N/A N/A 0.522±0.00 N/A 0.370±0.00 1.535±0.00 N/A N/A
ENSMUST00000144008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144199 0.473±0.07 0.672±0.00 0.510±0.09 0.375±0.25 0.663±0.00 N/A N/A N/A 1.439±0.59 1.189±0.15 0.076±0.00 1.149±0.58 0.286±0.14 N/A
ENSMUST00000150141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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