C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161328-ENSG00000185522 CGP 9606 11:537527-560779
GeneTranscriptPositionBiotype
ENSG00000099849 (RASSF7)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 		ENST00000397582 (RASSF7-001) 560956-564012 protein_coding
ENST00000397583 (RASSF7-003) 561052-564018 protein_coding
ENST00000414138 (RASSF7-005) 560971-563980 nonsense_mediated_decay
ENST00000431809 (RASSF7-002) 560404-563993 protein_coding
ENST00000454668 (RASSF7-004) 561450-564021 protein_coding
ENST00000524468 (RASSF7-006) 560987-562456 processed_transcript
ENST00000528736 (RASSF7-007) 561547-562205 protein_coding
ENST00000531112 (RASSF7-008) 562385-563685 nonsense_mediated_decay
ENSG00000161328 (LRRC56)
leucine rich repeat containing 56 		ENST00000270115 (LRRC56-001) 537527-554916 protein_coding
ENSG00000185522 (LMNTD2)
lamin tail domain containing 2 		ENST00000329451 (LMNTD2-001) 554864-560779 protein_coding
ENST00000441853 (LMNTD2-004) 556926-560730 protein_coding
ENST00000469990 (LMNTD2-002) 554855-556420 retained_intron
ENST00000486629 (LMNTD2-005) 557399-559382 protein_coding
ENST00000492515 (LMNTD2-003) 558476-560143 retained_intron
ENSG00000254815 (RP11-496I9.1)
 ENST00000527113 (RP11-496I9.1-004) 558892-560106 antisense
ENST00000527620 (RP11-496I9.1-001) 557595-560106 antisense
ENST00000533844 (RP11-496I9.1-002) 559476-560107 antisense
CIL_0003OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038637-ENSMUSG00000025500 CGP 10090 7:141194157-141214082
GeneTranscriptPositionBiotype
ENSMUSG00000025500 (1600016N20Rik)
lamin tail domain containing 2 		ENSMUST00000026573 (1600016N20Rik-201) 141210043-141214080 protein_coding
ENSMUST00000170841 (1600016N20Rik-202) 141210043-141214082 protein_coding
ENSMUSG00000038637 (Lrrc56)
leucine rich repeat containing 56 		ENSMUST00000047093 (Lrrc56-001) 141195078-141210047 protein_coding
ENSMUST00000070458 (Lrrc56-003) 141194176-141210049 protein_coding
ENSMUST00000084446 (Lrrc56-002) 141194157-141210055 protein_coding
ENSMUST00000144008 (Lrrc56-005) 141196934-141199835 processed_transcript
ENSMUST00000144199 (Lrrc56-004) 141194179-141200938 retained_intron
ENSMUST00000150141 (Lrrc56-006) 141195143-141198283 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OU_0001ENSG00000099849ENST00000397582ENST00000397583ENST00000414138ENST00000431809ENST00000454668ENST00000524468ENST00000528736ENST00000531112ENSG00000161328ENST00000270115ENSG00000185522ENST00000329451ENST00000441853ENST00000469990ENST00000486629ENST00000492515ENSG00000254815ENST00000527113ENST00000527620ENST00000533844CIL_0003OU_0002ENSMUSG00000025500ENSMUST00000026573ENSMUST00000170841ENSMUSG00000038637ENSMUST00000047093ENSMUST00000070458ENSMUST00000084446ENSMUST00000144008ENSMUST00000144199ENSMUST00000150141
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OU_0001ENSG00000099849ENST00000397582ENST00000397583ENST00000414138ENST00000431809ENST00000454668ENST00000524468ENST00000528736ENST00000531112ENSG00000161328ENST00000270115ENSG00000185522ENST00000329451ENST00000441853ENST00000469990ENST00000486629ENSG00000254815ENST00000527113ENST00000527620ENST00000533844CIL_0003OU_0002ENSMUSG00000025500ENSMUST00000026573ENSMUST00000170841ENSMUSG00000038637ENSMUST00000047093ENSMUST00000070458ENSMUST00000084446ENSMUST00000144199
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099849 ENST00000397582 1.563±0.00 N/A 0.131±0.00 0.593±0.38 1.700±0.00 2.087±0.00 0.982±0.00 16.960±0.00 10.329±0.00 11.665±0.00 N/A 4.904±3.17 9.837±2.19 1.997±0.00
ENST00000397583 N/A N/A N/A N/A 0.124±0.00 N/A 0.146±0.00 13.164±0.00 2.427±2.37 9.830±0.00 0.064±0.00 1.032±0.00 N/A N/A
ENST00000414138 N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A 12.203±0.00 N/A N/A
ENST00000431809 N/A N/A N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454668 N/A 0.981±0.00 N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A 2.993±1.89 1.887±0.00 1.311±0.00
ENST00000524468 N/A N/A N/A N/A N/A 0.955±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528736 N/A N/A N/A N/A N/A 0.645±0.00 N/A 0.883±0.00 N/A N/A N/A 0.330±0.00 N/A N/A
ENST00000531112 N/A N/A N/A 0.247±0.00 0.910±0.00 N/A N/A N/A N/A N/A 0.650±0.00 N/A N/A N/A
ENSG00000161328 ENST00000270115 0.239±0.00 1.692±0.00 0.205±0.00 0.422±0.40 0.485±0.00 0.360±0.00 0.157±0.00 0.489±0.39 0.220±0.00 0.915±0.71 0.041±0.00 3.818±1.70 0.211±0.09 12.717±6.00
ENSG00000185522 ENST00000329451 N/A 1.881±0.00 N/A N/A N/A N/A N/A 1.222±0.94 N/A 2.132±0.00 N/A 2.556±0.95 0.396±0.22 8.569±4.56
ENST00000441853 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A
ENST00000469990 N/A N/A N/A 0.225±0.00 N/A 0.652±0.00 N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A
ENST00000486629 N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254815 ENST00000527113 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.037±1.21 N/A N/A N/A N/A
ENST00000527620 0.133±0.00 0.704±0.00 0.095±0.00 N/A 0.514±0.00 0.168±0.03 N/A 1.381±0.98 0.712±0.00 1.670±1.19 0.059±0.00 2.679±2.03 0.323±0.23 2.111±0.00
ENST00000533844 N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A 0.265±0.00 6.402±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025500 ENSMUST00000026573 1.617±0.00 1.147±0.00 4.630±1.09 1.650±0.57 1.231±0.16 3.412±1.25 N/A 1.824±0.33 1.547±1.03 2.083±0.57 0.132±0.00 2.459±0.81 1.897±1.09 63.552±40.31
ENSMUST00000170841 1.482±0.00 N/A N/A N/A N/A N/A N/A 1.158±0.00 N/A N/A N/A N/A 0.517±0.27 N/A
ENSMUSG00000038637 ENSMUST00000047093 0.913±0.31 1.620±0.55 0.987±0.21 5.236±3.36 1.686±0.38 2.242±0.34 0.477±0.14 2.006±0.82 4.678±3.42 4.725±0.67 0.297±0.20 4.057±1.40 0.264±0.00 31.775±3.58
ENSMUST00000070458 1.035±0.33 1.137±0.25 1.219±0.04 N/A 1.856±0.45 2.899±1.00 0.590±0.16 1.461±0.33 1.296±0.51 1.111±0.00 0.362±0.15 1.457±0.51 1.472±0.54 21.528±5.32
ENSMUST00000084446 N/A N/A N/A 0.557±0.00 N/A N/A N/A N/A 0.522±0.00 N/A 0.370±0.00 1.535±0.00 N/A N/A
ENSMUST00000144008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144199 0.473±0.07 0.672±0.00 0.510±0.09 0.375±0.25 0.663±0.00 N/A N/A N/A 1.439±0.59 1.189±0.15 0.076±0.00 1.149±0.58 0.286±0.14 N/A
ENSMUST00000150141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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