C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adenosine deaminase, RNA-specific, B2 (non-functional)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185736 ADARB2 9606 - 10:1177318-1737476 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381305 ADARB2-005 1183151-1200385 protein_coding
  ENST00000381310 ADARB2-002 1182134-1200360 protein_coding
  ENST00000381312 ADARB2-001 1177318-1737476 protein_coding
  ENST00000469464 ADARB2-004 1215676-1240530 processed_transcript
  ENST00000474762 ADARB2-007 1182845-1186566 processed_transcript
  ENST00000477140 ADARB2-006 1199446-1200371 processed_transcript
  ENST00000490172 ADARB2-003 1183043-1188246 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000381305ENST00000381310ENST00000381312ENST00000469464ENST00000474762ENST00000477140ENST00000490172
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000381305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.566±0.00
ENST00000381310 0.061±0.00 N/A N/A N/A 1.639±0.00 N/A 0.348±0.00 N/A N/A 0.152±0.00 N/A 1.255±0.00
ENST00000381312 0.053±0.00 0.034±0.00 1.945±1.20 0.031±0.00 0.185±0.13 0.080±0.00 0.021±0.00 0.069±0.00 N/A 0.045±0.01 0.148±0.07 0.157±0.03
ENST00000469464 N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A 0.416±0.16 0.091±0.01 0.182±0.00 N/A
ENST00000474762 0.187±0.00 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A
ENST00000477140 N/A 0.249±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490172 N/A N/A N/A N/A N/A N/A 0.595±0.00 N/A N/A 0.881±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R8 CIL_0004R8_0002 CGP 10:1049538-1737476
CIL_0004R9 CIL_0004R9_0002 CGP 10:1177318-3137712

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003725 TAS double-stranded RNA binding
GO:0003727 TAS single-stranded RNA binding
GO:0004000 IEA adenosine deaminase activity
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071823 adarb2 adenosine deaminase, RNA-specific, B2 (RED2 homolog rat) protein_coding Danio_rerio
ENSMUSG00000052551 Adarb2 adenosine deaminase, RNA-specific, B2 protein_coding Mus_musculus

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