C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosine deaminase, RNA-specific, B2 (non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381312 ADARB2-001 ENSG00000185736 9606 - 10:1177318-1737476 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000381312
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000381312 0.053±0.00 0.034±0.00 1.945±1.20 0.031±0.00 0.185±0.13 0.080±0.00 0.021±0.00 0.069±0.00 0.045±0.01 0.148±0.07 0.157±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R8 CIL_0004R8_0002 CGP 10:1049538-1737476
CIL_0004R9 CIL_0004R9_0002 CGP 10:1177318-3137712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003725 TAS double-stranded RNA binding
GO:0003727 TAS single-stranded RNA binding
GO:0004000 IEA adenosine deaminase activity
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135574 Adarb2-003 protein_coding Mus_musculus 0 1214
ENSMUST00000064473 Adarb2-001 protein_coding Mus_musculus 0 1214
ENSMUST00000123187 Adarb2-004 protein_coding Mus_musculus 0 1186
ENSMUST00000139438 Adarb2-002 protein_coding Mus_musculus 4e-35 156

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