C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004R8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074611-ENSDARG00000071823 CGP 7955 24:3556682-3860978
GeneTranscriptPositionBiotype
ENSDARG00000071823 (adarb2)
adenosine deaminase, RNA-specific, B2 (RED2 homolog rat) 		ENSDART00000139596 (adarb2-001) 3615482-3860978 protein_coding
ENSDARG00000074611 (wdr37)
WD repeat domain 37 		ENSDART00000111491 (wdr37-201) 3563082-3604422 protein_coding
ENSDART00000134598 (wdr37-001) 3556682-3605698 protein_coding
ENSDART00000142407 (wdr37-002) 3556685-3582050 protein_coding
CIL_0004R8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000047056-ENSG00000185736 CGP 9606 10:1049538-1737476
GeneTranscriptPositionBiotype
ENSG00000047056 (WDR37)
WD repeat domain 37 		ENST00000263150 (WDR37-002) 1056858-1132170 protein_coding
ENST00000358220 (WDR37-001) 1049538-1132297 protein_coding
ENST00000381329 (WDR37-004) 1056404-1096626 protein_coding
ENST00000436154 (WDR37-005) 1074383-1096246 protein_coding
ENST00000482165 (WDR37-003) 1123807-1129252 processed_transcript
ENST00000620998 (WDR37-201) 1056404-1096625 protein_coding
ENSG00000185736 (ADARB2)
adenosine deaminase, RNA-specific, B2 (non-functional) 		ENST00000381305 (ADARB2-005) 1183151-1200385 protein_coding
ENST00000381310 (ADARB2-002) 1182134-1200360 protein_coding
ENST00000381312 (ADARB2-001) 1177318-1737476 protein_coding
ENST00000469464 (ADARB2-004) 1215676-1240530 processed_transcript
ENST00000474762 (ADARB2-007) 1182845-1186566 processed_transcript
ENST00000477140 (ADARB2-006) 1199446-1200371 processed_transcript
ENST00000490172 (ADARB2-003) 1183043-1188246 processed_transcript
ENSG00000229205 (LINC00200)
long intergenic non-protein coding RNA 200 		ENST00000425630 (LINC00200-001) 1159768-1164672 lincRNA
ENST00000583117 (LINC00200-002) 1159804-1160997 lincRNA
ENSG00000233052 (RP11-398B16.2)
 ENST00000432987 (RP11-398B16.2-001) 1361001-1361637 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004R8_0001ENSDARG00000071823ENSDART00000139596ENSDARG00000074611ENSDART00000111491ENSDART00000134598ENSDART00000142407CIL_0004R8_0002ENSG00000047056ENST00000263150ENST00000358220ENST00000381329ENST00000436154ENST00000482165ENST00000620998ENSG00000185736ENST00000381305ENST00000381310ENST00000381312ENST00000469464ENST00000474762ENST00000477140ENST00000490172ENSG00000229205ENST00000425630ENST00000583117ENSG00000233052ENST00000432987
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004R8_0001ENSDARG00000071823ENSDART00000139596ENSDARG00000074611ENSDART00000111491ENSDART00000134598ENSDART00000142407CIL_0004R8_0002ENSG00000047056ENST00000263150ENST00000358220ENST00000436154ENSG00000185736ENST00000381305ENST00000381310ENST00000381312ENST00000469464ENST00000474762ENST00000477140ENST00000490172ENSG00000229205ENST00000425630ENST00000583117ENSG00000233052ENST00000432987
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071823 ENSDART00000139596 N/A N/A N/A 1.775±0.24 N/A N/A 0.207±0.18 0.100±0.00 N/A N/A 0.162±0.00 N/A N/A N/A
ENSDARG00000074611 ENSDART00000111491 N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A N/A N/A N/A
ENSDART00000134598 N/A N/A N/A 32.599±7.02 N/A N/A 3.423±2.01 1.875±0.95 1.048±0.00 N/A 4.351±0.00 N/A N/A N/A
ENSDART00000142407 N/A N/A N/A N/A N/A N/A N/A 2.441±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000047056 ENST00000263150 1.819±0.00 4.968±0.00 0.621±0.00 3.645±0.12 2.173±1.31 0.947±0.41 2.718±1.47 1.772±1.55 1.126±0.83 2.572±0.00 1.843±0.92 2.107±0.65 1.404±0.53 3.547±0.80
ENST00000358220 N/A 1.050±0.00 N/A N/A N/A 0.447±0.00 N/A 0.918±0.33 N/A N/A N/A 1.215±0.62 0.716±0.13 0.920±0.37
ENST00000381329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436154 N/A N/A N/A N/A N/A N/A N/A N/A 1.757±0.00 N/A N/A 2.444±0.00 N/A 11.654±0.00
ENST00000482165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185736 ENST00000381305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.566±0.00
ENST00000381310 0.061±0.00 N/A N/A N/A N/A 1.639±0.00 N/A 0.348±0.00 N/A N/A N/A 0.152±0.00 N/A 1.255±0.00
ENST00000381312 0.053±0.00 N/A 0.034±0.00 1.945±1.20 0.031±0.00 0.185±0.13 0.080±0.00 0.021±0.00 0.069±0.00 N/A N/A 0.045±0.01 0.148±0.07 0.157±0.03
ENST00000469464 N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A 0.416±0.16 N/A 0.091±0.01 0.182±0.00 N/A
ENST00000474762 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A
ENST00000477140 N/A N/A 0.249±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490172 N/A N/A N/A N/A N/A N/A N/A 0.595±0.00 N/A N/A N/A 0.881±0.00 N/A N/A
ENSG00000229205 ENST00000425630 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A 0.028±0.01 0.220±0.04
ENST00000583117 N/A N/A N/A N/A 0.045±0.00 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A 0.405±0.14
ENSG00000233052 ENST00000432987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.053±0.00

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