C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 69
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185880 TRIM69 9606 + 15:44728988-44767829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329464 TRIM69-201 44736362-44767827 protein_coding
  ENST00000338264 TRIM69-001 44736566-44767829 protein_coding
  ENST00000558173 TRIM69-006 44752918-44767827 protein_coding
  ENST00000558329 TRIM69-004 44736530-44767825 protein_coding
  ENST00000559315 TRIM69-008 44729073-44736562 processed_transcript
  ENST00000559390 TRIM69-002 44728988-44767827 protein_coding
  ENST00000560141 TRIM69-005 44729001-44734000 processed_transcript
  ENST00000560442 TRIM69-003 44736530-44767825 protein_coding
  ENST00000560554 TRIM69-007 44729055-44736613 processed_transcript
  ENST00000561043 TRIM69-010 44736535-44767827 protein_coding
  ENST00000561170 TRIM69-011 44758774-44767443 protein_coding
  ENST00000561237 TRIM69-009 44729142-44731715 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329464ENST00000338264ENST00000559315ENST00000560141ENST00000561043ENST00000561170ENST00000561237
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.780±11.85
ENST00000338264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.364±7.46
ENST00000559315 N/A N/A N/A N/A N/A N/A N/A 3.350±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560141 7.263±0.00 7.152±0.00 2.472±0.00 9.328±1.04 5.019±0.98 7.365±4.62 12.020±6.66 6.819±6.36 3.296±1.34 10.700±5.01 6.672±0.35 7.165±2.98 6.685±0.70 6.567±0.00
ENST00000561043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.233±0.00
ENST00000561170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 218.038±0.00
ENST00000561237 N/A N/A N/A N/A 5.460±0.00 4.789±0.00 N/A N/A 8.633±0.00 N/A N/A 6.260±1.42 5.623±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DL CIL_0004DL_0001 CGP 15:44711477-44767829
CIL_0004DM CIL_0004DM_0001 CGP 15:44728988-44979229

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016607 IDA nuclear speck
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059905 FP015862.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000061762 trim108 tripartite motif containing 108 protein_coding Danio_rerio
ENSDARG00000062429 trim109 tripartite motif containing 109 protein_coding Danio_rerio
ENSMUSG00000033368 Trim69 tripartite motif-containing 69 protein_coding Mus_musculus

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