C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185880-ENSG00000167014 CGP 9606 15:44728988-44979229
GeneTranscriptPositionBiotype
ENSG00000167014 (C15orf43)
chromosome 15 open reading frame 43 		ENST00000340827 (C15orf43-001) 44956702-44979229 protein_coding
ENST00000557864 (C15orf43-003) 44956735-44978612 nonsense_mediated_decay
ENST00000559137 (C15orf43-002) 44956710-44978639 nonsense_mediated_decay
ENSG00000185880 (TRIM69)
tripartite motif containing 69 		ENST00000329464 (TRIM69-201) 44736362-44767827 protein_coding
ENST00000338264 (TRIM69-001) 44736566-44767829 protein_coding
ENST00000558173 (TRIM69-006) 44752918-44767827 protein_coding
ENST00000558329 (TRIM69-004) 44736530-44767825 protein_coding
ENST00000559315 (TRIM69-008) 44729073-44736562 processed_transcript
ENST00000559390 (TRIM69-002) 44728988-44767827 protein_coding
ENST00000560141 (TRIM69-005) 44729001-44734000 processed_transcript
ENST00000560442 (TRIM69-003) 44736530-44767825 protein_coding
ENST00000560554 (TRIM69-007) 44729055-44736613 processed_transcript
ENST00000561043 (TRIM69-010) 44736535-44767827 protein_coding
ENST00000561170 (TRIM69-011) 44758774-44767443 protein_coding
ENST00000561237 (TRIM69-009) 44729142-44731715 processed_transcript
ENSG00000259187 (CTD-2008A1.1)
 ENST00000558419 (CTD-2008A1.1-001) 44826540-44827094 lincRNA
ENSG00000259231 (CTD-2014N11.2)
 ENST00000561335 (CTD-2014N11.2-001) 44919376-44920820 processed_pseudogene
ENSG00000259304 (CTD-2014N11.3)
 ENST00000559765 (CTD-2014N11.3-001) 44970035-44971178 processed_pseudogene
ENSG00000259479 (SORD2P)
sorbitol dehydrogenase 2, pseudogene 		ENST00000558556 (SORD2P-001) 44827060-44861850 transcribed_unprocessed_pseudogene
ENST00000561384 (SORD2P-002) 44827200-44884694 processed_transcript
ENST00000562107 (SORD2P-003) 44826371-44828731 retained_intron
ENST00000564140 (SORD2P-004) 44826951-44830437 processed_transcript
ENSG00000259742 (CTD-2014N11.1)
 ENST00000558917 (CTD-2014N11.1-001) 44914802-44930622 unprocessed_pseudogene
ENSG00000276121 (CTD-2008A1.3)
 ENST00000611946 (CTD-2008A1.3-001) 44778196-44778721 lincRNA
CIL_0004DM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033368-ENSMUSG00000027229 CGP 10090 2:122160700-122206397
GeneTranscriptPositionBiotype
ENSMUSG00000027229 (4933406J08Rik)
RIKEN cDNA 4933406J08 gene 		ENSMUST00000028661 (4933406J08Rik-001) 122186272-122206397 protein_coding
ENSMUST00000149861 (4933406J08Rik-002) 122186474-122204961 processed_transcript
ENSMUSG00000027233 (Patl2)
protein associated with topoisomerase II homolog 2 (yeast) 		ENSMUST00000028665 (Patl2-001) 122120108-122186189 protein_coding
ENSMUSG00000033368 (Trim69)
tripartite motif-containing 69 		ENSMUST00000036089 (Trim69-001) 122160700-122179027 protein_coding
ENSMUST00000143088 (Trim69-002) 122160802-122179024 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DM_0001ENSG00000167014ENST00000340827ENST00000557864ENST00000559137ENSG00000185880ENST00000329464ENST00000338264ENST00000558173ENST00000558329ENST00000559315ENST00000559390ENST00000560141ENST00000560442ENST00000560554ENST00000561043ENST00000561170ENST00000561237ENSG00000259187ENST00000558419ENSG00000259231ENST00000561335ENSG00000259304ENST00000559765ENSG00000259479ENST00000558556ENST00000561384ENST00000562107ENST00000564140ENSG00000259742ENST00000558917ENSG00000276121ENST00000611946CIL_0004DM_0002ENSMUSG00000027229ENSMUST00000028661ENSMUST00000149861ENSMUSG00000027233ENSMUST00000028665ENSMUSG00000033368ENSMUST00000036089ENSMUST00000143088
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DM_0001ENSG00000167014ENST00000340827ENST00000557864ENST00000559137ENSG00000185880ENST00000329464ENST00000338264ENST00000559315ENST00000560141ENST00000561043ENST00000561170ENST00000561237ENSG00000259187ENST00000558419ENSG00000259231ENST00000561335ENSG00000259304ENST00000559765ENSG00000259479ENST00000558556ENST00000561384ENST00000562107ENST00000564140ENSG00000259742ENST00000558917ENSG00000276121ENST00000611946CIL_0004DM_0002ENSMUSG00000027229ENSMUST00000028661ENSMUST00000149861ENSMUSG00000027233ENSMUST00000028665ENSMUSG00000033368ENSMUST00000036089ENSMUST00000143088
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167014 ENST00000340827 N/A N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A 0.028±0.00 N/A N/A N/A 5.200±0.24
ENST00000557864 0.055±0.00 0.228±0.00 N/A 0.060±0.00 0.170±0.00 0.035±0.00 0.161±0.00 0.286±0.00 N/A N/A 0.050±0.00 0.071±0.03 0.051±0.01 3.541±2.12
ENST00000559137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.242±0.00
ENSG00000185880 ENST00000329464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.780±11.85
ENST00000338264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.364±7.46
ENST00000558173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559315 N/A N/A N/A N/A N/A N/A N/A 3.350±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560141 7.263±0.00 7.152±0.00 2.472±0.00 9.328±1.04 5.019±0.98 7.365±4.62 12.020±6.66 6.819±6.36 3.296±1.34 10.700±5.01 6.672±0.35 7.165±2.98 6.685±0.70 6.567±0.00
ENST00000560442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.233±0.00
ENST00000561170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 218.038±0.00
ENST00000561237 N/A N/A N/A N/A 5.460±0.00 4.789±0.00 N/A N/A 8.633±0.00 N/A N/A 6.260±1.42 5.623±0.00 N/A
ENSG00000259187 ENST00000558419 N/A N/A 0.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.380±0.00 N/A 0.065±0.00
ENSG00000259231 ENST00000561335 N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000259304 ENST00000559765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENSG00000259479 ENST00000558556 0.323±0.00 0.090±0.00 0.197±0.00 N/A 0.038±0.00 0.121±0.00 0.147±0.00 1.084±0.95 2.077±1.87 0.416±0.00 0.108±0.00 0.160±0.09 0.113±0.00 1.372±0.00
ENST00000561384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.17 N/A 0.213±0.12
ENST00000562107 N/A N/A 0.170±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 0.025±0.00 0.017±0.00
ENST00000564140 N/A N/A N/A 0.207±0.00 N/A N/A N/A 0.133±0.00 N/A N/A N/A 0.106±0.00 0.206±0.00 N/A
ENSG00000259742 ENST00000558917 0.025±0.00 N/A N/A 0.076±0.00 0.024±0.00 0.046±0.00 N/A N/A N/A 0.113±0.00 N/A N/A N/A 0.093±0.02
ENSG00000276121 ENST00000611946 N/A 0.014±0.00 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027229 ENSMUST00000028661 N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A 0.008±0.00 N/A N/A 0.015±0.00 0.091±0.07 1.068±0.36
ENSMUST00000149861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.554±0.00
ENSMUSG00000027233 ENSMUST00000028665 N/A 0.041±0.01 0.003±0.00 0.009±0.00 0.030±0.00 N/A 0.021±0.00 0.020±0.01 0.031±0.01 0.031±0.01 0.017±0.00 1.054±0.47 1.267±0.48 0.269±0.17
ENSMUSG00000033368 ENSMUST00000036089 0.101±0.04 0.066±0.00 0.023±0.01 0.008±0.00 0.070±0.02 N/A 0.027±0.02 0.036±0.03 0.064±0.03 0.063±0.04 0.030±0.01 0.090±0.04 0.154±0.07 65.145±22.11
ENSMUST00000143088 0.011±0.01 0.051±0.00 N/A N/A 0.108±0.00 N/A 0.018±0.00 0.037±0.03 0.012±0.00 0.034±0.00 N/A N/A 0.218±0.00 N/A

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